RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 RBMXL2O75526 392 aaKnown RBP1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 PEX11BO96011 259 aa1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 IFNGR1P15260 489 aa1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 PLA2G5P39877 138 aa1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 RPL6Q02878 288 aaKnown RBP1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 MAP3K11Q16584 847 aa1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 ZNF517Q6ZMY9 492 aaPredicted RBP1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 IFNL2Q8IZJ0 200 aa1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 TMEM176AQ96HP8 235 aa1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 OSBPL7Q9BZF2 842 aa1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 C12orf65Q9H3J6 166 aaKnown RBP1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 FBXL21Q9UKT6 434 aa1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 PPM1HQ9ULR3 514 aa1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 SETD1BQ9UPS6 1966 aaKnown RBP1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 COL11A2P13942 1736 aaPredicted RBP1.17□□□□□ -2.22
RNU6-557P-201ENST00000516842 CGB1A6NKQ9 187 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 H3BNC9 293 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 NTN1O95631 604 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 FUCA1P04066 466 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 SCNN1GP51170 649 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 NKX3-2P78367 333 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 SF3B2Q13435 895 aaKnown RBP1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 CYP2R1Q6VVX0 501 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 Q6ZRM9 215 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 RHOUQ7L0Q8 258 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 MILR1Q7Z6M3 343 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 FAM126BQ8IXS8 530 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 PROKR1Q8TCW9 393 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 TMC1Q8TDI8 760 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 FCRL3Q96P31 734 aaPredicted RBP1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 VPS33BQ9H267 617 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 PLA2G3Q9NZ20 509 aa1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 ZNF70Q9UC06 446 aaPredicted RBP1.16□□□□□ -2.22
RNU6-557P-201ENST00000516842 MATN4O95460 622 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 TBC1D8O95759 1140 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 C1RP00736 705 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 IGKV2-30P06310 120 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 GSNP06396 782 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 LMNB1P20700 586 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 NR4A1P22736 598 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 PTGS2P35354 604 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 RRADP55042 308 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 SRPK2P78362 688 aaKnown RBP1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 TOB2Q14106 344 aaPredicted RBP1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 PTPAQ15257 358 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 TSNAXIP1Q2TAA8 658 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 ARSHQ5FYA8 562 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 CPNE8Q86YQ8 564 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 WBP1Q96G27 269 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 AJUBAQ96IF1 538 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 DSCC1Q9BVC3 393 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 ZKSCAN5Q9Y2L8 839 aa1.15□□□□□ -2.23
RNU6-557P-201ENST00000516842 HMCN1Q96RW7 5635 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 SUPT5HO00267 1087 aaKnown RBP1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 B3GALT2O43825 422 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 HTR3BO95264 441 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 ATG7O95352 703 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 TFE3P19532 575 aaPredicted RBP1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 ARHGAP4P98171 946 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 SRSF4Q08170 494 aaKnown RBP1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 HYAL1Q12794 435 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 TBR1Q16650 682 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 ZNF628Q5EBL2 1059 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 HEATR6Q6AI08 1181 aaKnown RBP1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 Q6ZTC4 211 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 KRTAP5-5Q701N2 237 aaPredicted RBP1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 PROSER2Q86WR7 435 aaPredicted RBP1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 GPR135Q8IZ08 494 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 THEMISQ8N1K5 641 aaPredicted RBP1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 D2HGDHQ8N465 521 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 SH2D3CQ8N5H7 860 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 SIMC1Q8NDZ2 872 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 SLC25A43Q8WUT9 341 aaPredicted RBP1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 TMEM255BQ8WV15 326 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 BRF1Q92994 677 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 YIPF4Q9BSR8 244 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 SRRTQ9BXP5 876 aaKnown RBP1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 MKRN2Q9H000 416 aaKnown RBP1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 MIR1-1HGQ9H1L0 117 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 POLR3KQ9Y2Y1 108 aaPredicted RBP1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 INSL6Q9Y581 213 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 PCDHB12Q9Y5F1 795 aa1.14□□□□□ -2.23
RNU6-557P-201ENST00000516842 ANKRD33BA6NCL7 494 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 CYP7B1O75881 506 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 ABHD16AO95870 558 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 BMP15O95972 392 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 KNG1P01042 644 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 CD3EP07766 207 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 TYRP1P17643 537 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 HHEXQ03014 270 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 AUHQ13825 339 aaKnown RBP1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 USP10Q14694 798 aaKnown RBP1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 BSPRYQ5W0U4 402 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 CWF19L1Q69YN2 538 aaKnown RBP1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 FBXL22Q6P050 247 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 TEPPQ6URK8 271 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 Q6YL49 198 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 BNC2Q6ZN30 1099 aaPredicted RBP1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 AGMOQ6ZNB7 445 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 SV2BQ7L1I2 683 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms