RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 DGKIO75912 1065 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 PLATP00750 562 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 TCF3P15923 654 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 STAT5AP42229 794 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 MAP4K2Q12851 820 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 SURF1Q15526 300 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 PRR31Q5SQ13 230 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 STEAP3Q658P3 488 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 MRM1Q6IN84 353 aaKnown RBP4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 PLEKHH3Q7Z736 793 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 GGNQ86UU5 652 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 TMEM145Q8NBT3 493 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 PHOSPHO1Q8TCT1 267 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 KCTD13Q8WZ19 329 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 TOE1Q96GM8 510 aaKnown RBP4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 LCORQ96JN0 433 aaPredicted RBP4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 CLIC6Q96NY7 704 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 SMPD4Q9NXE4 827 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 CLDND1Q9NY35 253 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 MYRFQ9Y2G1 1151 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 KRIT1O00522 736 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 DDX3XO00571 662 aaKnown RBP eCLIP4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 GJB6O95452 261 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 FGRP09769 529 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ETFBP38117 255 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ARID5AQ03989 594 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 SF1Q15637 639 aaKnown RBP4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 PRSS53Q2L4Q9 553 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 CR1LQ2VPA4 569 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 SLC10A6Q3KNW5 377 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 SLC35F1Q5T1Q4 408 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 PRAMEF18Q5VWM3 479 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 MCTP2Q6DN12 878 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 CYP4F22Q6NT55 531 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TXNDC5Q8NBS9 432 aaKnown RBP4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 SAMD11Q96NU1 681 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TMEM209Q96SK2 561 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 RBM15Q96T37 977 aaKnown RBP eCLIP4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 FBXL7Q9UJT9 491 aa4.21□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TCRBV5S2A0A599 114 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ARNTLO00327 626 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TADA3O75528 432 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 CYP1A1P04798 512 aaPredicted RBP4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ZNF28P17035 718 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 PPP2R2AP63151 447 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ADAM17P78536 824 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ADAM9Q13443 819 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TBC1D10BQ4KMP7 808 aaPredicted RBP4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 STK32CQ86UX6 486 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TRIM48Q8IWZ4 208 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 C1orf159Q96HA4 380 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 LOXL4Q96JB6 756 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 SYT3Q9BQG1 590 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 SMOC1Q9H4F8 434 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ZNF408Q9H9D4 720 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 L2HGDHQ9H9P8 463 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 GPR27Q9NS67 375 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 MYOTQ9UBF9 498 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 INVSQ9Y283 1065 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 NPFFR2Q9Y5X5 522 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ZNF536O15090 1300 aa4.2□□□□□ -1.74
SCARNA16.2-201ENST00000516520 IQCA1LA6NCM1 817 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 CAPNS1P04632 268 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 LCP1P13796 627 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 INSRRP14616 1297 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 CPZQ66K79 652 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 DENND5AQ6IQ26 1287 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TEPPQ6URK8 271 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 GLB1LQ6UWU2 654 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 RSPO2Q6UXX9 243 aaPredicted RBP4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ARRDC4Q8NCT1 418 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TTLL11Q8NHH1 800 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 MICAL1Q8TDZ2 1067 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 SGSM3Q96HU1 749 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TINF2Q9BSI4 451 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 TMEM168Q9H0V1 697 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 HSPBP1Q9NZL4 362 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 NUB1Q9Y5A7 615 aa4.19□□□□□ -1.74
SCARNA16.2-201ENST00000516520 LAMTOR5O43504 91 aa4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 HSP90AA2PQ14568 343 aaPredicted RBP4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 PUM1Q14671 1186 aaKnown RBP eCLIP4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 MCF2L2Q86YR7 1114 aa4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 CHST13Q8NET6 341 aa4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ZSWIM3Q96MP5 696 aa4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 YTHDC1Q96MU7 727 aaKnown RBP4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 IER2Q9BTL4 223 aa4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 C1QTNF3Q9BXJ4 246 aa4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 ASH2LQ9UBL3 628 aa4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 FTSJ1Q9UET6 329 aa4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 CCDC9Q9Y3X0 531 aaKnown RBP4.18□□□□□ -1.74
SCARNA16.2-201ENST00000516520 A0A1W2PQU0 124 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 C1QTNF3-AMACRE9PGA6 284 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 LRG1P02750 347 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 DNAJA1P31689 397 aaKnown RBP4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 IL13P35225 146 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 DDR2Q16832 855 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 USP53Q70EK8 1073 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 SLC43A3Q8NBI5 491 aa4.17□□□□□ -1.74
SCARNA16.2-201ENST00000516520 DCAF4Q8WV16 495 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms