RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 EHHADHQ08426 723 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 NOLC1Q14978 699 aaKnown RBP eCLIP0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 NOM1Q5C9Z4 860 aaKnown RBP0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 GFI1BQ5VTD9 330 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 HLA-DQA1Q5Y7H0 255 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 TRMT10BQ6PF06 316 aaKnown RBP0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 PI16Q6UXB8 463 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 JAMLQ86YT9 394 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 FRS2Q8WU20 508 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 FUBP1Q96AE4 644 aaKnown RBP0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 AJUBAQ96IF1 538 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 KMT5AQ9NQR1 393 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 PLA2G3Q9NZ20 509 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 CROTQ9UKG9 612 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 WASF3Q9UPY6 502 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 MAFBQ9Y5Q3 323 aaPredicted RBP0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 KIF26BQ2KJY2 2108 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 CAPN14A8MX76 684 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 ITGB1P05556 798 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 CELA2AP08217 269 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 CELA3AP09093 270 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 ZNF888P0CJ79 500 aaPredicted RBP0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 VAV1P15498 845 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 PLA2G5P39877 138 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 STAT5AP42229 794 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 MCAMP43121 646 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 TAF6P49848 677 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 CRHR2Q13324 411 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 BRAPQ7Z569 592 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 PHACTR4Q8IZ21 702 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 NETO2Q8NC67 525 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 THAP3Q8WTV1 239 aaPredicted RBP0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 DDB2Q92466 427 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 GAL3ST3Q96A11 431 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 CCDC74AQ96AQ1 378 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 IGSF5Q9NSI5 407 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 TFIP11Q9UBB9 837 aaKnown RBP0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 NUDT5Q9UKK9 219 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 FZD1Q9UP38 647 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 EPN1Q9Y6I3 576 aaPredicted RBP0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 AHNAK2Q8IVF2 5795 aa0.47□□□□□ -2.33
RNU6-542P-201ENST00000516405 POM121CA8CG34 1229 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 TRAF5O00463 557 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 BRINP1O60477 761 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 CGAP01215 116 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 POLGP54098 1239 aaPredicted RBP0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 FOXI1Q12951 378 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 KCNV1Q6PIU1 500 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 Q6ZRM9 215 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 ZC3H18Q86VM9 953 aaKnown RBP0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 RETREG2Q8NC44 543 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 FAM200AQ8TCP9 573 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 CTAGE1Q96RT6 745 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 EBF3Q9H4W6 596 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 CYP4F11Q9HBI6 524 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 SYBUQ9NX95 663 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 SEPT3Q9UH03 358 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 ICKQ9UPZ9 632 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 PCDHB5Q9Y5E4 795 aa0.46□□□□□ -2.34
RNU6-542P-201ENST00000516405 MEIS1O00470 390 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 RTL8CO15255 209 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 SMAD6O43541 496 aaKnown RBP0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 SIGLEC6O43699 453 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 ENDOUP21128 410 aaKnown RBP0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 MPSTP25325 297 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 ZEB1P37275 1124 aaPredicted RBP0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 RPS19P39019 145 aaKnown RBP0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 THBS3P49746 956 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 PROK1P58294 105 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 LINC00205P59089 165 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 TAP1Q03518 808 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 KLF9Q13886 244 aaPredicted RBP0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 ETFDHQ16134 617 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 SLC44A4Q53GD3 710 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 HDGFL1Q5TGJ6 251 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 LRRC55Q6ZSA7 311 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 CXorf67Q86X51 503 aaPredicted RBP0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 IFNL2Q8IZJ0 200 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 GJD3Q8N144 294 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 FBXO18Q8NFZ0 1043 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 MARK4Q96L34 752 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 CLIC6Q96NY7 704 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 KIAA1683Q9H0B3 1180 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 METTL14Q9HCE5 456 aaKnown RBP0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 SEMA4GQ9NTN9 838 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 CXXC1Q9P0U4 656 aaPredicted RBP0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 RWDD3Q9Y3V2 267 aa0.45□□□□□ -2.34
RNU6-542P-201ENST00000516405 GTPBP1O00178 669 aaKnown RBP0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 SGSM2O43147 1006 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 GADD45BO75293 160 aaPredicted RBP0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 MOSPD3O75425 235 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 CYP7B1O75881 506 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 CXCR5P32302 372 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 TNNI2P48788 182 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 HHEXQ03014 270 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 ADCY1Q08828 1119 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 LRRC14Q15048 493 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 CHRNA2Q15822 529 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 ZNF260Q3ZCT1 412 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 GSPT2Q8IYD1 628 aaKnown RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms