RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 CTDSPL2Q05D32 466 aa12.36□□□□□ -0.43
CLDND1-231ENST00000515620 SMAD4Q13485 552 aaKnown RBP12.36□□□□□ -0.43
CLDND1-231ENST00000515620 KIAA0753Q2KHM9 967 aa12.36□□□□□ -0.43
CLDND1-231ENST00000515620 TRIM67Q6ZTA4 783 aa12.36□□□□□ -0.43
CLDND1-231ENST00000515620 BMP8AQ7Z5Y6 402 aa12.36□□□□□ -0.43
CLDND1-231ENST00000515620 DHX37Q8IY37 1157 aaKnown RBP12.36□□□□□ -0.43
CLDND1-231ENST00000515620 SEC62Q99442 399 aaKnown RBP12.36□□□□□ -0.43
CLDND1-231ENST00000515620 RSPH10B2B2RC85 870 aa12.35□□□□□ -0.43
CLDND1-231ENST00000515620 F2P00734 622 aa12.35□□□□□ -0.43
CLDND1-231ENST00000515620 RSPH10BP0C881 870 aa12.35□□□□□ -0.43
CLDND1-231ENST00000515620 CTNNB1P35222 781 aa12.35□□□□□ -0.43
CLDND1-231ENST00000515620 THPOP40225 353 aa12.35□□□□□ -0.43
CLDND1-231ENST00000515620 HYAL1Q12794 435 aa12.35□□□□□ -0.43
CLDND1-231ENST00000515620 CTC1Q2NKJ3 1217 aa12.35□□□□□ -0.43
CLDND1-231ENST00000515620 USH1GQ495M9 461 aa12.35□□□□□ -0.43
CLDND1-231ENST00000515620 PLEKHG4Q58EX7 1191 aa12.35□□□□□ -0.43
CLDND1-231ENST00000515620 PRRX2Q99811 253 aa12.35□□□□□ -0.43
CLDND1-231ENST00000515620 IFIH1Q9BYX4 1025 aaKnown RBP12.35□□□□□ -0.43
CLDND1-231ENST00000515620 ZFHX2Q9C0A1 2572 aaPredicted RBP12.35□□□□□ -0.43
CLDND1-231ENST00000515620 WDR19Q8NEZ3 1342 aa12.35□□□□□ -0.43
CLDND1-231ENST00000515620 TRIOO75962 3097 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 CFAP54Q96N23 3096 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 NLRC5Q86WI3 1866 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 HAS3O00219 553 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 GTF2F1P35269 517 aaKnown RBP eCLIP12.34□□□□□ -0.43
CLDND1-231ENST00000515620 FOXK2Q01167 660 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 HIC1Q14526 733 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 FBXL6Q8N531 539 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 TOP1MTQ969P6 601 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 ZBTB40Q9NUA8 1239 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 CD207Q9UJ71 328 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 PNMA2Q9UL42 364 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 ATG2AQ2TAZ0 1938 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 C5orf42Q9H799 3197 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 KMT2EQ8IZD2 1858 aa12.34□□□□□ -0.43
CLDND1-231ENST00000515620 GRM6O15303 877 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 LINC01565O15544 149 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 CTSHP09668 335 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 TOP1P11387 765 aaKnown RBP12.33□□□□□ -0.44
CLDND1-231ENST00000515620 NOVP48745 357 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 PKN1Q16512 942 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 SERINC5Q86VE9 423 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 PPTC7Q8NI37 304 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 SEPT8Q92599 483 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 EMID1Q96A84 441 aaPredicted RBP12.33□□□□□ -0.44
CLDND1-231ENST00000515620 GPATCH3Q96I76 525 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 C11orf84Q9BUA3 381 aaPredicted RBP12.33□□□□□ -0.44
CLDND1-231ENST00000515620 IGFLR1Q9H665 355 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 TOMM22Q9NS69 142 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 RALGAPA2Q2PPJ7 1873 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 MYO7AQ13402 2215 aa12.33□□□□□ -0.44
CLDND1-231ENST00000515620 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.32□□□□□ -0.44
CLDND1-231ENST00000515620 SORBS3O60504 671 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 PDHBP11177 359 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 NDUFV1P49821 464 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 VCPP55072 806 aaKnown RBP12.32□□□□□ -0.44
CLDND1-231ENST00000515620 ZXDAP98168 799 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 STXBP2Q15833 593 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 FIBCD1Q8N539 461 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 NSUN6Q8TEA1 469 aaKnown RBP12.32□□□□□ -0.44
CLDND1-231ENST00000515620 TAAR1Q96RJ0 339 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 TMEM47Q9BQJ4 181 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 OSBPL7Q9BZF2 842 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 LMAN2LQ9H0V9 348 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 COL20A1Q9P218 1284 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 DDX41Q9UJV9 622 aaKnown RBP12.32□□□□□ -0.44
CLDND1-231ENST00000515620 DDX19BQ9UMR2 479 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 MRVI1Q9Y6F6 885 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 CACNA1HO95180 2353 aa12.32□□□□□ -0.44
CLDND1-231ENST00000515620 C5orf67F2Z3F1 127 aa12.31□□□□□ -0.44
CLDND1-231ENST00000515620 FOXP2O15409 715 aa12.31□□□□□ -0.44
CLDND1-231ENST00000515620 EIF2AK2P19525 551 aaKnown RBP12.31□□□□□ -0.44
CLDND1-231ENST00000515620 ZNF543Q08ER8 600 aa12.31□□□□□ -0.44
CLDND1-231ENST00000515620 LAMC2Q13753 1193 aa12.31□□□□□ -0.44
CLDND1-231ENST00000515620 RRP12Q5JTH9 1297 aaKnown RBP12.31□□□□□ -0.44
CLDND1-231ENST00000515620 RGS22Q8NE09 1264 aa12.31□□□□□ -0.44
CLDND1-231ENST00000515620 SYTL5Q8TDW5 730 aaPredicted RBP12.31□□□□□ -0.44
CLDND1-231ENST00000515620 TBC1D5Q92609 795 aa12.31□□□□□ -0.44
CLDND1-231ENST00000515620 ATOH1Q92858 354 aaPredicted RBP12.31□□□□□ -0.44
CLDND1-231ENST00000515620 IL17RAQ96F46 866 aa12.31□□□□□ -0.44
CLDND1-231ENST00000515620 RMDN3Q96TC7 470 aa12.31□□□□□ -0.44
CLDND1-231ENST00000515620 ALG13Q9NP73 1137 aaKnown RBP12.31□□□□□ -0.44
CLDND1-231ENST00000515620 SPTBN4Q9H254 2564 aa12.31□□□□□ -0.44
CLDND1-231ENST00000515620 C17orf102A2RUQ5 167 aa12.3□□□□□ -0.44
CLDND1-231ENST00000515620 ORC4O43929 436 aa12.3□□□□□ -0.44
CLDND1-231ENST00000515620 RB1P06400 928 aa12.3□□□□□ -0.44
CLDND1-231ENST00000515620 HOXD8P13378 290 aaPredicted RBP12.3□□□□□ -0.44
CLDND1-231ENST00000515620 BMPR1AP36894 532 aa12.3□□□□□ -0.44
CLDND1-231ENST00000515620 ZMYM1Q5SVZ6 1142 aa12.3□□□□□ -0.44
CLDND1-231ENST00000515620 ATP6V0A1Q93050 837 aa12.3□□□□□ -0.44
CLDND1-231ENST00000515620 IWS1Q96ST2 819 aa12.3□□□□□ -0.44
CLDND1-231ENST00000515620 FSD1Q9BTV5 496 aa12.3□□□□□ -0.44
CLDND1-231ENST00000515620 CPVLQ9H3G5 476 aa12.3□□□□□ -0.44
CLDND1-231ENST00000515620 ADGRA3Q8IWK6 1321 aa12.3□□□□□ -0.44
CLDND1-231ENST00000515620 KIAA1217Q5T5P2 1943 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 LOC730098B7Z3J9 87 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 MMP1P03956 469 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 LINC00271P0C7V0 271 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 MS4A1P11836 297 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 SIGLEC14Q08ET2 396 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms