RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, human

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM3-222	ENST00000515609	STRN	O43815	780 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	FAM86B2	P0C5J1	330 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	FCER1A	P12319	257 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	PLCG1	P19174	1290 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	RPA1	P27694	616 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	ERCC5	P28715	1186 aa	Predicted RBP	10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	AFM	P43652	599 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	KRT76	Q01546	638 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	CCDC173	Q0VFZ6	552 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	PNOC	Q13519	176 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	DHX8	Q14562	1220 aa	Known RBP	10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	KCNB1	Q14721	858 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	KARS	Q15046	597 aa	Known RBP	10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	PGM5	Q15124	567 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	STXBP2	Q15833	593 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	CCL15	Q16663	113 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	MUM1L1	Q5H9M0	696 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	SPRYD7	Q5W111	196 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	PDXDC2P	Q6P474	469 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	USP49	Q70CQ1	688 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	NCAPG2	Q86XI2	1143 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	SMC1B	Q8NDV3	1235 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	GPRC5A	Q8NFJ5	357 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	LARP4B	Q92615	738 aa	Known RBP	10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	CCDC102A	Q96A19	550 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	PDCD2L	Q9BRP1	358 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	POLR3C	Q9BUI4	534 aa	Predicted RBP	10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	RBSN	Q9H1K0	784 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	NMRK2	Q9NPI5	230 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	SLC5A4	Q9NY91	659 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	UBIAD1	Q9Y5Z9	338 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	IVNS1ABP	Q9Y6Y0	642 aa		10.63	□□□□□ -0.71
TPM3-222	ENST00000515609	PVALEF	A0A1B0GWK0	134 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	MSH4	O15457	936 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	EIF3J	O75822	258 aa	Known RBP	10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	TPM3	P06753	285 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	NR3C2	P08235	984 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	XRCC6	P12956	609 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	SARS	P49591	514 aa	Known RBP	10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	JAK3	P52333	1124 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	HUNK	P57058	714 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	DPYD	Q12882	1025 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	PSMD2	Q13200	908 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	DGKZ	Q13574	1117 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	CNNM4	Q6P4Q7	775 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	MOB2	Q70IA6	237 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	VSIG10L	Q86VR7	867 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	ABRA	Q8N0Z2	381 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	RNF214	Q8ND24	703 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	CNKSR2	Q8WXI2	1034 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	TBC1D5	Q92609	795 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	LENG9	Q96B70	501 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	C7orf25	Q9BPX7	421 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	PAGR1	Q9BTK6	254 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	DNAJC25	Q9H1X3	360 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	A1CF	Q9NQ94	594 aa	Known RBP	10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	KCNH7	Q9NS40	1196 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	KCND2	Q9NZV8	630 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	MYH7B	A7E2Y1	1941 aa		10.62	□□□□□ -0.71
TPM3-222	ENST00000515609	PARP14	Q460N5	1801 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	POTEM	A6NI47	508 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	GOLGA6L6	A8MZA4	724 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	PDHX	O00330	501 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	PSMD10	O75832	226 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	ITGBL1	O95965	494 aa	Predicted RBP	10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	RPN1	P04843	607 aa	Known RBP	10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	POTEI	P0CG38	1075 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	POTEJ	P0CG39	1038 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	TGFB3	P10600	412 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	MYCL	P12524	364 aa	Predicted RBP	10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	EIF2AK2	P19525	551 aa	Known RBP	10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	MYL5	Q02045	173 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	PDE4D	Q08499	809 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	SREBF2	Q12772	1141 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	MORC3	Q14149	939 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	EPHA7	Q15375	998 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	NCAPH2	Q6IBW4	605 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	GPAT2	Q6NUI2	795 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	DLK2	Q6UY11	383 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	SLC30A10	Q6XR72	485 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	OTOP1	Q7RTM1	612 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	REM2	Q8IYK8	340 aa	Predicted RBP	10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	ANKRD20A12P	Q8NF67	263 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	RAD54L	Q92698	747 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	TRIM44	Q96DX7	344 aa	Predicted RBP	10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	HHIPL1	Q96JK4	782 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	NACC1	Q96RE7	527 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	TAAR1	Q96RJ0	339 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	EXOC1	Q9NV70	894 aa		10.61	□□□□□ -0.71
TPM3-222	ENST00000515609	PTPRF	P10586	1907 aa		10.6	□□□□□ -0.71
TPM3-222	ENST00000515609		A0A087X0B3	334 aa		10.6	□□□□□ -0.71
TPM3-222	ENST00000515609	TESPA1	A2RU30	521 aa	Predicted RBP	10.6	□□□□□ -0.71
TPM3-222	ENST00000515609	ASB14	A6NK59	587 aa		10.6	□□□□□ -0.71
TPM3-222	ENST00000515609	BIN1	O00499	593 aa		10.6	□□□□□ -0.71
TPM3-222	ENST00000515609	PSMA7	O14818	248 aa		10.6	□□□□□ -0.71
TPM3-222	ENST00000515609	EDIL3	O43854	480 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms