RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 SCARF1Q14162 830 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 ASTE1Q2TB18 679 aaPredicted RBP14.06□□□□□ -0.16
SMAD1-215ENST00000515385 ZNF654Q8IZM8 581 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 LPIN2Q92539 896 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 TAF4BQ92750 862 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 TNFRSF25Q93038 417 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 PBKQ96KB5 322 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 CCDC134Q9H6E4 229 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 MAGEF1Q9HAY2 307 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 PANK4Q9NVE7 773 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 AMOTL2Q9Y2J4 779 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 L3MBTL1Q9Y468 752 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 MYH7P12883 1935 aa14.06□□□□□ -0.16
SMAD1-215ENST00000515385 FAM205CA6NFA0 338 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 CTNND1O60716 968 aaKnown RBP14.05□□□□□ -0.16
SMAD1-215ENST00000515385 LINGO3P0C6S8 592 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 ERVK-9P63128 1117 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 NAB2Q15742 525 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 CMPK2Q5EBM0 449 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 CROCCP2Q86T23 111 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 UBLCP1Q8WVY7 318 aaPredicted RBP14.05□□□□□ -0.16
SMAD1-215ENST00000515385 STRBPQ96SI9 672 aaKnown RBP14.05□□□□□ -0.16
SMAD1-215ENST00000515385 TSC22D3Q99576 134 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 YIPF3Q9GZM5 350 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 NAPBQ9H115 298 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 PCDHGC5Q9Y5F6 944 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 TIAM2Q8IVF5 1701 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 KLRC4O43908 158 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 RASSF7Q02833 373 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 CCDC57Q2TAC2 916 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 KRT71Q3SY84 523 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 COBLL1Q53SF7 1204 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 EARS2Q5JPH6 523 aaKnown RBP14.05□□□□□ -0.16
SMAD1-215ENST00000515385 LRRC59Q96AG4 307 aaKnown RBP14.05□□□□□ -0.16
SMAD1-215ENST00000515385 ZNF594Q96JF6 807 aaPredicted RBP14.05□□□□□ -0.16
SMAD1-215ENST00000515385 CUEDC2Q9H467 287 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 DISC1Q9NRI5 854 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 ANKIB1Q9P2G1 1089 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 SALL4Q9UJQ4 1053 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 FBXL5Q9UKA1 691 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 SIK3Q9Y2K2 1263 aa14.05□□□□□ -0.16
SMAD1-215ENST00000515385 TNRQ92752 1358 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 MYH13Q9UKX3 1938 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 E7ENQ6 273 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 CCDC188H7C350 402 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 PALMO75781 387 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 FGFR1OPO95684 399 aaKnown RBP14.04□□□□□ -0.16
SMAD1-215ENST00000515385 ATP2A2P16615 1042 aaKnown RBP14.04□□□□□ -0.16
SMAD1-215ENST00000515385 ATP4AP20648 1035 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 LACTBP83111 547 aaPredicted RBP14.04□□□□□ -0.16
SMAD1-215ENST00000515385 ATP11AP98196 1134 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 TBC1D25Q3MII6 688 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 RPUSD2Q8IZ73 545 aaKnown RBP14.04□□□□□ -0.16
SMAD1-215ENST00000515385 IFNL3Q8IZI9 196 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 CCDC82Q8N4S0 544 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 OR2W6PQ8NHA6 318 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 SCFD2Q8WU76 684 aa14.04□□□□□ -0.16
SMAD1-215ENST00000515385 SYN2Q92777 582 aaPredicted RBP14.04□□□□□ -0.16
SMAD1-215ENST00000515385 PUS3Q9BZE2 481 aaKnown RBP14.04□□□□□ -0.16
SMAD1-215ENST00000515385 RNF41Q9H4P4 317 aaPredicted RBP14.04□□□□□ -0.16
SMAD1-215ENST00000515385 PAPOLBQ9NRJ5 636 aaKnown RBP14.04□□□□□ -0.16
SMAD1-215ENST00000515385 RGPD8O14715 1765 aaPredicted RBP14.04□□□□□ -0.16
SMAD1-215ENST00000515385 SART1O43290 800 aaKnown RBP14.03□□□□□ -0.16
SMAD1-215ENST00000515385 VIMP08670 466 aaKnown RBP14.03□□□□□ -0.16
SMAD1-215ENST00000515385 MRPS35P82673 323 aaKnown RBP14.03□□□□□ -0.16
SMAD1-215ENST00000515385 SLC39A6Q13433 755 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 TCIRG1Q13488 830 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 PDIA5Q14554 519 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 PKN1Q16512 942 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 VWA3BQ502W6 1294 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 ACTRT1Q8TDG2 376 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 NUP133Q8WUM0 1156 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 RAB17Q9H0T7 212 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 FAM114A2Q9NRY5 505 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 CHCHD3Q9NX63 227 aaKnown RBP14.03□□□□□ -0.16
SMAD1-215ENST00000515385 ZNF532Q9HCE3 1301 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 LRRD1A4D1F6 860 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 BUB1O43683 1085 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 NPTXRO95502 500 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 CNGA1P29973 690 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 HOXA7P31268 230 aaPredicted RBP14.03□□□□□ -0.16
SMAD1-215ENST00000515385 LBRQ14739 615 aaKnown RBP14.03□□□□□ -0.16
SMAD1-215ENST00000515385 ANKRD20A2Q5SQ80 823 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 THEMIS2Q5TEJ8 643 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 ANKRD20A1Q5TYW2 823 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 ANKRD20A3Q5VUR7 823 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 PDXDC1Q6P996 788 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 TMC3Q7Z5M5 1100 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 KLHL7Q8IXQ5 586 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 LMNTD2Q8IXW0 634 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 STAG2Q8N3U4 1231 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 ZNF496Q96IT1 587 aaPredicted RBP14.03□□□□□ -0.16
SMAD1-215ENST00000515385 SLITRK6Q9H5Y7 841 aa14.03□□□□□ -0.16
SMAD1-215ENST00000515385 UBR1Q8IWV7 1749 aa14.02□□□□□ -0.16
SMAD1-215ENST00000515385 BTNL10A8MVZ5 291 aa14.02□□□□□ -0.16
SMAD1-215ENST00000515385 F8VZ95 297 aa14.02□□□□□ -0.16
SMAD1-215ENST00000515385 MMEP08473 750 aa14.02□□□□□ -0.16
SMAD1-215ENST00000515385 PDE6AP16499 860 aa14.02□□□□□ -0.16
SMAD1-215ENST00000515385 ALDH5A1P51649 535 aaPredicted RBP14.02□□□□□ -0.16
SMAD1-215ENST00000515385 NCALDP61601 193 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms