RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 SMCHD1A6NHR9 2005 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 IGLV3-22A0A075B6J6 115 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 ATP2A1O14983 1001 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 MARCH6O60337 910 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 BCRP11274 1271 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
SNF8-214ENST00000515174 UBASH3AP57075 661 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 SNAP25P60880 206 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 SPIRE1Q08AE8 756 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 CDKAL1Q5VV42 579 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 MOB2Q70IA6 237 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 ADSSL1Q8N142 457 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 RASSF8Q8NHQ8 419 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 LRRC15Q8TF66 581 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 LARP4BQ92615 738 aaKnown RBP11.44□□□□□ -0.58
SNF8-214ENST00000515174 RAD54LQ92698 747 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 DHTKD1Q96HY7 919 aaPredicted RBP11.44□□□□□ -0.58
SNF8-214ENST00000515174 CTAGE1Q96RT6 745 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 FBXO28Q9NVF7 368 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 IFNKQ9P0W0 207 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 NFE2L3Q9Y4A8 694 aa11.44□□□□□ -0.58
SNF8-214ENST00000515174 FRMPD4Q14CM0 1322 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 RPTORQ8N122 1335 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.43□□□□□ -0.58
SNF8-214ENST00000515174 FAM86B1E9PN63 330 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 MEIS1O00470 390 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 ZBED4O75132 1171 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 USP2O75604 605 aaPredicted RBP11.43□□□□□ -0.58
SNF8-214ENST00000515174 TBC1D8O95759 1140 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 FAM86B2P0C5J1 330 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 VCAM1P19320 739 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 RPA1P27694 616 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 SPAG1Q07617 926 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 SPP2Q13103 211 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 STIM1Q13586 685 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 KMT5BQ4FZB7 885 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 HAUS3Q68CZ6 603 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 UNC13DQ70J99 1090 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 CCDC186Q7Z3E2 898 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 RASAL3Q86YV0 1011 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 DRC7Q8IY82 874 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 ERMNQ8TAM6 284 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 SNX29Q8TEQ0 813 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 NOC3LQ8WTT2 800 aaKnown RBP11.43□□□□□ -0.58
SNF8-214ENST00000515174 CLEC4DQ8WXI8 215 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 ZKSCAN4Q969J2 545 aaPredicted RBP11.43□□□□□ -0.58
SNF8-214ENST00000515174 CDK5RAP3Q96JB5 506 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 POLR3CQ9BUI4 534 aaPredicted RBP11.43□□□□□ -0.58
SNF8-214ENST00000515174 XPO4Q9C0E2 1151 aaKnown RBP11.43□□□□□ -0.58
SNF8-214ENST00000515174 BLZF1Q9H2G9 400 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 AFG3L2Q9Y4W6 797 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 SNCAIPQ9Y6H5 919 aa11.43□□□□□ -0.58
SNF8-214ENST00000515174 MSH4O15457 936 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 CFBP00751 764 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 CASP1P29466 404 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 PRCPP42785 496 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 KCNJ6P48051 423 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 MAP3K9P80192 1104 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 SETQ01105 290 aaPredicted RBP11.42□□□□□ -0.58
SNF8-214ENST00000515174 EHHADHQ08426 723 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 PAK1Q13153 545 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 PPP2R5CQ13362 524 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 VGLL4Q14135 290 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 TTLL12Q14166 644 aaPredicted RBP11.42□□□□□ -0.58
SNF8-214ENST00000515174 NR1I3Q14994 352 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 ZYXQ15942 572 aaKnown RBP11.42□□□□□ -0.58
SNF8-214ENST00000515174 TKFCQ3LXA3 575 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 CEP55Q53EZ4 464 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 PRR16Q569H4 304 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 XRRA1Q6P2D8 792 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 CCDC174Q6PII3 467 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 APTXQ7Z2E3 356 aaKnown RBP11.42□□□□□ -0.58
SNF8-214ENST00000515174 LRRC8AQ8IWT6 810 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 SPC24Q8NBT2 197 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 KIAA1524Q8TCG1 905 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 ZNF296Q8WUU4 475 aaPredicted RBP11.42□□□□□ -0.58
SNF8-214ENST00000515174 TBC1D5Q92609 795 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 STAMQ92783 540 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 SLC5A5Q92911 643 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 RPAP3Q9H6T3 665 aaPredicted RBP11.42□□□□□ -0.58
SNF8-214ENST00000515174 KCND1Q9NSA2 647 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 BMP2KQ9NSY1 1161 aaPredicted RBP11.42□□□□□ -0.58
SNF8-214ENST00000515174 SPTLC3Q9NUV7 552 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
SNF8-214ENST00000515174 CCPG1Q9ULG6 757 aa11.42□□□□□ -0.58
SNF8-214ENST00000515174 A0A1B0GTH6 734 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 BICDL2A1A5D9 508 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 POTEMA6NI47 508 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 MYMKA6NI61 221 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 UNCXA6NJT0 531 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 VWA5AO00534 786 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 PSMA7O14818 248 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 PSMD10O75832 226 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 SERPINC1P01008 464 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 ATP1A3P13637 1013 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 CDK11BP21127 795 aaKnown RBP11.41□□□□□ -0.58
SNF8-214ENST00000515174 HOXA13P31271 388 aaPredicted RBP11.41□□□□□ -0.58
SNF8-214ENST00000515174 DSG3P32926 999 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 NF2P35240 595 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 ZNF76P36508 570 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms