RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 C6orf118Q5T5N4 469 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 GALNT17Q6IS24 598 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 CUEDC2Q9H467 287 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 STAP2Q9UGK3 403 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 BCS1LQ9Y276 419 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 EXOC1LA0A1B0GW35 172 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 ESYT2A0FGR8 921 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 SLFN14P0C7P3 912 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 BRDTQ58F21 947 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-214ENST00000515035 SEPT10Q9P0V9 454 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 IVNS1ABPQ9Y6Y0 642 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 PREX2Q70Z35 1606 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 PCCAP05165 728 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-214ENST00000515035 NR2F2P24468 414 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 YARSP54577 528 aaKnown RBP14.4□□□□□ -0.1
TCOF1-214ENST00000515035 CUL1Q13616 776 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 AOC3Q16853 763 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 NBPF10Q6P3W6 841 aaKnown RBP14.4□□□□□ -0.1
TCOF1-214ENST00000515035 OTUD6AQ7L8S5 288 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 PNMA1Q8ND90 353 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 MCUQ8NE86 351 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 DEPTORQ8TB45 409 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 TGFBRAP1Q8WUH2 860 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 FOXP1Q9H334 677 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-214ENST00000515035 AZI2Q9H6S1 392 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 KDRP35968 1356 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 ADCY2Q08462 1091 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 ARMCX5Q6P1M9 558 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 ZBTB38Q8NAP3 1195 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-214ENST00000515035 PLAAQ9Y263 795 aa14.4□□□□□ -0.1
TCOF1-214ENST00000515035 WDR91A4D1P6 747 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 ZBBXA8MT70 800 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 GNGT2O14610 69 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 LMNAP02545 664 aaKnown RBP14.39□□□□□ -0.11
TCOF1-214ENST00000515035 MMEP08473 750 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 FAM102BQ5T8I3 360 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 UNC5CLQ8IV45 518 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 ZNF653Q96CK0 615 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 EIF2AQ9BY44 585 aaKnown RBP14.39□□□□□ -0.11
TCOF1-214ENST00000515035 USP6P35125 1406 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 PDE6AP16499 860 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 PTK2Q05397 1052 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 NAA30Q147X3 362 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-214ENST00000515035 GPR162Q16538 588 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 ZNF658Q5TYW1 1059 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-214ENST00000515035 PDZD4Q76G19 769 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-214ENST00000515035 PSTPIP2Q9H939 334 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 CASP2P42575 452 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 RINT1Q6NUQ1 792 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 NRBF2Q96F24 287 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 DYDC2Q96IM9 177 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 PITPNM3Q9BZ71 974 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 FGFR1OP2Q9NVK5 253 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 MAP3K15Q6ZN16 1313 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 LIG4P49917 911 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 MRPS25P82663 173 aaKnown RBP14.39□□□□□ -0.11
TCOF1-214ENST00000515035 KIF23Q02241 960 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-214ENST00000515035 GNPTABQ3T906 1256 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 FAM133AQ8N9E0 248 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 STOML1Q9UBI4 398 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 NUB1Q9Y5A7 615 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 PCDHA13Q9Y5I0 950 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 ANKARQ7Z5J8 1434 aa14.39□□□□□ -0.11
TCOF1-214ENST00000515035 MAPK4P31152 587 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 MYL7Q01449 175 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 DR1Q01658 176 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 SARM1Q6SZW1 724 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 RAPH1Q70E73 1250 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 KRT27Q7Z3Y8 459 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 MAP7D3Q8IWC1 876 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 SLFN12Q8IYM2 578 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 POMGNT1Q8WZA1 660 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 AP1M1Q9BXS5 423 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 CCDC68Q9H2F9 335 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 OSBPL3Q9H4L5 887 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 ZNF335Q9H4Z2 1342 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-214ENST00000515035 KLRF2D3W0D1 207 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 SPAG7O75391 227 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 DCTN3O75935 186 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 PDHA1P08559 390 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 GGCXP38435 758 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 IL6STP40189 918 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-214ENST00000515035 KIF11P52732 1056 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 FKBP3Q00688 224 aaKnown RBP14.38□□□□□ -0.11
TCOF1-214ENST00000515035 MYO1EQ12965 1108 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 FAM167BQ9BTA0 163 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 ORC6Q9Y5N6 252 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 CYP21A2P08686 494 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 DPY19L2Q6NUT2 758 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 NME8Q8N427 588 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 SYT2Q8N9I0 419 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-214ENST00000515035 SMCR8Q8TEV9 937 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-214ENST00000515035 LARP4BQ92615 738 aaKnown RBP14.38□□□□□ -0.11
TCOF1-214ENST00000515035 NACA2Q9H009 215 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 MIS12Q9H081 205 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 DDX25Q9UHL0 483 aaKnown RBP14.38□□□□□ -0.11
TCOF1-214ENST00000515035 RWDD2AQ9UIY3 292 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 PPME1Q9Y570 386 aa14.38□□□□□ -0.11
TCOF1-214ENST00000515035 MORC2Q9Y6X9 1032 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-214ENST00000515035 CFLARO15519 480 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms