RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 HDAC9Q9UKV0 1011 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 PRR12Q9ULL5 1215 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 SYNPO2Q9UMS6 1093 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 ZBTB12Q9Y330 459 aaPredicted RBP9.13□□□□□ -0.95
CPNE4-211ENST00000514439 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 FAM86B1E9PN63 330 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 MED24O75448 989 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 NDUFA10O95299 355 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 ABL1P00519 1130 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 FOSP01100 380 aaPredicted RBP9.12□□□□□ -0.95
CPNE4-211ENST00000514439 FAM86B2P0C5J1 330 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 PLA2G4BP0C869 781 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 HOXA13P31271 388 aaPredicted RBP9.12□□□□□ -0.95
CPNE4-211ENST00000514439 ARHGAP25P42331 645 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 Q4G0T1 1027 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 KIAA1755Q5JYT7 1200 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 FAM26FQ5R3K3 315 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 LRRC55Q6ZSA7 311 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 OGFOD1Q8N543 542 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 RETREG2Q8NC44 543 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 ACER1Q8TDN7 264 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 ERGIC2Q96RQ1 377 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 NUP58Q9BVL2 599 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 ARHGEF10LQ9HCE6 1279 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 AGPAT5Q9NUQ2 364 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 PANK4Q9NVE7 773 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 RGS17Q9UGC6 210 aaPredicted RBP9.12□□□□□ -0.95
CPNE4-211ENST00000514439 EPN1Q9Y6I3 576 aaPredicted RBP9.12□□□□□ -0.95
CPNE4-211ENST00000514439 PSME4Q14997 1843 aa9.12□□□□□ -0.95
CPNE4-211ENST00000514439 EFCAB8A8MWE9 144 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 TBX3O15119 743 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 SLC26A4O43511 780 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 STAT2P52630 851 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 PPP2R3AQ06190 1150 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 MEA1Q16626 185 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 TSR1Q2NL82 804 aaKnown RBP9.11□□□□□ -0.95
CPNE4-211ENST00000514439 SPDYE2Q495Y8 402 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 ZNF569Q5MCW4 686 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 FKBP15Q5T1M5 1219 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 HAUS3Q68CZ6 603 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 GPBP1Q86WP2 473 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 MYOCDQ8IZQ8 938 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 UBXN4Q92575 508 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 PCMTD1Q96MG8 357 aaPredicted RBP9.11□□□□□ -0.95
CPNE4-211ENST00000514439 TSG101Q99816 390 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 FGFBP2Q9BYJ0 223 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 VEZTQ9HBM0 779 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 BMP2KQ9NSY1 1161 aaPredicted RBP9.11□□□□□ -0.95
CPNE4-211ENST00000514439 ZBTB21Q9ULJ3 1066 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 TMX2Q9Y320 296 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 REXO2Q9Y3B8 237 aaKnown RBP9.11□□□□□ -0.95
CPNE4-211ENST00000514439 ABCB11O95342 1321 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 NPHP3-ACAD11A0A0J9YXS1 232 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 POTEFA5A3E0 1075 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 SPDYE4A6NLX3 237 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 FGFR1OPO95684 399 aaKnown RBP9.11□□□□□ -0.95
CPNE4-211ENST00000514439 POTEIP0CG38 1075 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 H2AFXP16104 143 aaPredicted RBP9.11□□□□□ -0.95
CPNE4-211ENST00000514439 DPEP1P16444 411 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 CYP11B2P19099 503 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 KCNA3P22001 575 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 ZBED6P86452 979 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 VWA3BQ502W6 1294 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 ZCWPW2Q504Y3 356 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 FAM83BQ5T0W9 1011 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 NCAPH2Q6IBW4 605 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 FOXR2Q6PJQ5 311 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 POTEGQ6S5H5 508 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 POTEEQ6S8J3 1075 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 NDST4Q9H3R1 872 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 GOPCQ9HD26 462 aa9.11□□□□□ -0.95
CPNE4-211ENST00000514439 A0A1W2PQJ5 194 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 CIITAP33076 1130 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 SLC12A3P55017 1021 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 MAN2A1Q16706 1144 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 FIGNQ5HY92 759 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 CATSPER3Q86XQ3 398 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 CCDC65Q8IXS2 484 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 SLC35F6Q8N357 371 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 FEZ1Q99689 392 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 TMEM39BQ9GZU3 492 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 TBC1D7Q9P0N9 293 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.1□□□□□ -0.95
CPNE4-211ENST00000514439 SIK3Q9Y2K2 1263 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 PCDHA2Q9Y5H9 948 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 PIK3CDO00329 1044 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 MSH4O15457 936 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 SPATA31C1P0DKV0 1188 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 CBX1P83916 185 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 RAD51AP2Q09MP3 1159 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 GLIPR1L2Q4G1C9 344 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 ERMNQ8TAM6 284 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 CYP2W1Q8TAV3 490 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 FAM20AQ96MK3 541 aa9.1□□□□□ -0.95
CPNE4-211ENST00000514439 ZNHIT6Q9NWK9 470 aaKnown RBP9.1□□□□□ -0.95
CPNE4-211ENST00000514439 FRMD3A2A2Y4 597 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 CTAGE9A4FU28 777 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 MEIS1O00470 390 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms