RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 EDIL3O43854 480 aa11.15□□□□□ -0.62
RNF4-221ENST00000513643 PQBP1O60828 265 aaKnown RBP11.15□□□□□ -0.62
RNF4-221ENST00000513643 PPFIA4O75335 1185 aa11.15□□□□□ -0.62
RNF4-221ENST00000513643 FOSP01100 380 aaPredicted RBP11.15□□□□□ -0.62
RNF4-221ENST00000513643 UBA1P22314 1058 aaKnown RBP11.15□□□□□ -0.62
RNF4-221ENST00000513643 FXR1P51114 621 aaKnown RBP eCLIP11.15□□□□□ -0.62
RNF4-221ENST00000513643 UBE2SQ16763 222 aa11.15□□□□□ -0.62
RNF4-221ENST00000513643 HSDL1Q3SXM5 330 aa11.15□□□□□ -0.62
RNF4-221ENST00000513643 NFRKBQ6P4R8 1299 aa11.15□□□□□ -0.62
RNF4-221ENST00000513643 PHKBQ93100 1093 aa11.15□□□□□ -0.62
RNF4-221ENST00000513643 GPRASP2Q96D09 838 aa11.15□□□□□ -0.62
RNF4-221ENST00000513643 ZFP91Q96JP5 570 aaPredicted RBP11.15□□□□□ -0.62
RNF4-221ENST00000513643 CTAGE1Q96RT6 745 aa11.15□□□□□ -0.62
RNF4-221ENST00000513643 MRVI1Q9Y6F6 885 aa11.15□□□□□ -0.62
RNF4-221ENST00000513643 DCDC2CA8MYV0 355 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 M0R2N6 131 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 MAFGO15525 162 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 FIBPO43427 364 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 PFKFB2O60825 505 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 CTDNEP1O95476 244 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 F2P00734 622 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 TIMP1P01033 207 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 SREBF1P36956 1147 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 ADCY7P51828 1080 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 AK2P54819 239 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 NAPAP54920 295 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 PSMC6P62333 389 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 CCT2P78371 535 aaKnown RBP11.14□□□□□ -0.63
RNF4-221ENST00000513643 PTPN11Q06124 597 aaPredicted RBP11.14□□□□□ -0.63
RNF4-221ENST00000513643 SCRN1Q12765 414 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 AP3B2Q13367 1082 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 NPY5RQ15761 445 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 LRIT3Q3SXY7 679 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 BRDTQ58F21 947 aaPredicted RBP11.14□□□□□ -0.63
RNF4-221ENST00000513643 FAM177A1Q8N128 213 aaPredicted RBP11.14□□□□□ -0.63
RNF4-221ENST00000513643 VWCEQ96DN2 955 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
RNF4-221ENST00000513643 C16orf70Q9BSU1 422 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 JADE2Q9NQC1 790 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 SH3GLB2Q9NR46 395 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 RTEL1Q9NZ71 1219 aa11.14□□□□□ -0.63
RNF4-221ENST00000513643 MEIS1O00470 390 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 B4GALT4O60513 344 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 ATP9AO75110 1047 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 GGPS1O95749 300 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 CYP3A4P08684 503 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 KCNA2P16389 499 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 HOXC8P31273 242 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 RBM25P49756 843 aaKnown RBP11.13□□□□□ -0.63
RNF4-221ENST00000513643 NEDD9Q14511 834 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 ANKRD1Q15327 319 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 DGKDQ16760 1214 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 NBPF20Q3BBV1 942 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 GNPTABQ3T906 1256 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 METTL7BQ6UX53 244 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 DHX37Q8IY37 1157 aaKnown RBP11.13□□□□□ -0.63
RNF4-221ENST00000513643 BADQ92934 168 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 TRPV6Q9H1D0 765 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 TMEM39AQ9NV64 488 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 TELO2Q9Y4R8 837 aa11.13□□□□□ -0.63
RNF4-221ENST00000513643 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 SPDYE3A6NKU9 549 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 MYL3P08590 195 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 CIITAP33076 1130 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 EPHB4P54760 987 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 MDM2Q00987 491 aaPredicted RBP11.12□□□□□ -0.63
RNF4-221ENST00000513643 MCTP2Q6DN12 878 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 MFSD5Q6N075 450 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 C16orf59Q7L2K0 433 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 NIPA1Q7RTP0 329 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 NLRX1Q86UT6 975 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 TDHQ8IZJ6 230 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 CYP2W1Q8TAV3 490 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 VTI1AQ96AJ9 217 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 CDHR1Q96JP9 859 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 SPATA33Q96N06 139 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 GPR20Q99678 358 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 MXRA8Q9BRK3 442 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 NOC4LQ9BVI4 516 aaKnown RBP11.12□□□□□ -0.63
RNF4-221ENST00000513643 SLC26A6Q9BXS9 759 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 ANO3Q9BYT9 981 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 PRKAG2Q9UGJ0 569 aa11.12□□□□□ -0.63
RNF4-221ENST00000513643 NAP1L2Q9ULW6 460 aaPredicted RBP11.12□□□□□ -0.63
RNF4-221ENST00000513643 IGLV3-22A0A075B6J6 115 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 PPFIA3O75145 1194 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 DEXIO95424 95 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 FDPSP14324 419 aaKnown RBP11.11□□□□□ -0.63
RNF4-221ENST00000513643 GNA11P29992 359 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 ARHGAP4P98171 946 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 RBL2Q08999 1139 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 ST3GAL1Q11201 340 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 HIC1Q14526 733 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 ME3Q16798 604 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 CEP55Q53EZ4 464 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 CYFIP1Q7L576 1253 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 DAGLBQ8NCG7 672 aa11.11□□□□□ -0.63
RNF4-221ENST00000513643 GIMAP8Q8ND71 665 aaPredicted RBP11.11□□□□□ -0.63
RNF4-221ENST00000513643 CCDC12Q8WUD4 166 aaPredicted RBP11.11□□□□□ -0.63
RNF4-221ENST00000513643 UBE2OQ9C0C9 1292 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms