RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 DOCK3Q8IZD9 2030 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 KIAA1217Q5T5P2 1943 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 COBLO75128 1261 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 PFKFB1P16118 471 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 LIG1P18858 919 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC01550-203ENST00000512901 FCGRTP55899 365 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 C1QTNF8P60827 252 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 ZNF792Q3KQV3 632 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 RASSF8Q8NHQ8 419 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 SYMPKQ92797 1274 aaKnown RBP11.81□□□□□ -0.52
LINC01550-203ENST00000512901 GPRASP2Q96D09 838 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 GOLPH3LQ9H4A5 285 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 PKD2L1Q9P0L9 805 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 LRWD1Q9UFC0 647 aa11.81□□□□□ -0.52
LINC01550-203ENST00000512901 MCM3APO60318 1980 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 MGAMO43451 1857 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 ZNF236Q9UL36 1845 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 THSD7BQ9C0I4 1608 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 LOC102724159A0A0B4J2E5 919 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 GAS7O60861 476 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 EDNRBP24530 442 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 UBA7P41226 1012 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 FAM160A1Q05DH4 1040 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 MAP2K5Q13163 448 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 KIF22Q14807 665 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 PWP2Q15269 919 aaKnown RBP11.8□□□□□ -0.52
LINC01550-203ENST00000512901 LRCH2Q5VUJ6 765 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 CDHR1Q96JP9 859 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 FGD4Q96M96 766 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 AK8Q96MA6 479 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 INPP4AQ96PE3 977 aaPredicted RBP11.8□□□□□ -0.52
LINC01550-203ENST00000512901 NUDT12Q9BQG2 462 aa11.8□□□□□ -0.52
LINC01550-203ENST00000512901 POTEMA6NI47 508 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 IPO5O00410 1097 aaKnown RBP11.79□□□□□ -0.52
LINC01550-203ENST00000512901 PSMC4P43686 418 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 NDUFA8P51970 172 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 LACTBP83111 547 aaPredicted RBP11.79□□□□□ -0.52
LINC01550-203ENST00000512901 SP3Q02447 781 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 PDIA5Q14554 519 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 SEPT14Q6ZU15 432 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 EEPD1Q7L9B9 569 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 SOCS4Q8WXH5 440 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 SLC5A5Q92911 643 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 EPSTI1Q96J88 318 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 TEKT3Q9BXF9 490 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 CFHR5Q9BXR6 569 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 AGO4Q9HCK5 861 aaKnown RBP11.79□□□□□ -0.52
LINC01550-203ENST00000512901 DACT1Q9NYF0 836 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 TCEAL9Q9UHQ7 104 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 KCNH3Q9ULD8 1083 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 MAFGO15525 162 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 NR1I2O75469 434 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 CDC25AP30304 524 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 SYKP43405 635 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 ZRSR1Q15695 479 aaKnown RBP11.79□□□□□ -0.52
LINC01550-203ENST00000512901 MORN1Q5T089 497 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 NCAPH2Q6IBW4 605 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 CAVIN1Q6NZI2 390 aaKnown RBP11.79□□□□□ -0.52
LINC01550-203ENST00000512901 USP49Q70CQ1 688 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 ARMCX2Q7L311 632 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 ZNF467Q7Z7K2 595 aaPredicted RBP11.79□□□□□ -0.52
LINC01550-203ENST00000512901 PDILTQ8N807 584 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 IGSF22Q8N9C0 903 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 SYAP1Q96A49 352 aaPredicted RBP11.79□□□□□ -0.52
LINC01550-203ENST00000512901 DIS3Q9Y2L1 958 aaKnown RBP11.79□□□□□ -0.52
LINC01550-203ENST00000512901 LRRC37A2A6NM11 1700 aa11.79□□□□□ -0.52
LINC01550-203ENST00000512901 PP2D1A8MPX8 630 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 DDX39AO00148 427 aaKnown RBP11.78□□□□□ -0.52
LINC01550-203ENST00000512901 KINO60870 393 aaKnown RBP11.78□□□□□ -0.52
LINC01550-203ENST00000512901 RGS20O76081 388 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 RGS2P41220 211 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 KRT79Q5XKE5 535 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 CABP7Q86V35 215 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 MAML3Q96JK9 1138 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 RIT2Q99578 217 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 PANK2Q9BZ23 570 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 TBC1D22BQ9NU19 505 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 CHMP2AO43633 222 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 PSMD10O75832 226 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 CYP2B6P20813 491 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 FBXO16Q8IX29 292 aaPredicted RBP11.78□□□□□ -0.52
LINC01550-203ENST00000512901 FMR1NBQ8N0W7 255 aaPredicted RBP11.78□□□□□ -0.52
LINC01550-203ENST00000512901 ERMNQ8TAM6 284 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 NPLOC4Q8TAT6 608 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 SNX29Q8TEQ0 813 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 CALML4Q96GE6 196 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 CDK5RAP3Q96JB5 506 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 SDF4Q9BRK5 362 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 ARHGAP39Q9C0H5 1083 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 DDX19AQ9NUU7 478 aaKnown RBP11.78□□□□□ -0.52
LINC01550-203ENST00000512901 CCDC39Q9UFE4 941 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 HPSEQ9Y251 543 aa11.78□□□□□ -0.52
LINC01550-203ENST00000512901 FAM237AA0A1B0GTK4 181 aa11.77□□□□□ -0.53
LINC01550-203ENST00000512901 POLR2DO15514 142 aaKnown RBP11.77□□□□□ -0.53
LINC01550-203ENST00000512901 ZNF202O95125 648 aa11.77□□□□□ -0.53
LINC01550-203ENST00000512901 CTGFP29279 349 aa11.77□□□□□ -0.53
LINC01550-203ENST00000512901 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.53
LINC01550-203ENST00000512901 SEMA3FQ13275 785 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms