RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 LY6KQ17RY6 165 aa13.62□□□□□ -0.23
RNF4-216ENST00000511859 KIAA0753Q2KHM9 967 aa13.62□□□□□ -0.23
RNF4-216ENST00000511859 PLEKHG4Q58EX7 1191 aa13.62□□□□□ -0.23
RNF4-216ENST00000511859 PANK1Q8TE04 598 aa13.62□□□□□ -0.23
RNF4-216ENST00000511859 EMID1Q96A84 441 aaPredicted RBP13.62□□□□□ -0.23
RNF4-216ENST00000511859 ALG1Q9BT22 464 aa13.62□□□□□ -0.23
RNF4-216ENST00000511859 LMAN2LQ9H0V9 348 aa13.62□□□□□ -0.23
RNF4-216ENST00000511859 MTMR7Q9Y216 660 aa13.62□□□□□ -0.23
RNF4-216ENST00000511859 WDR19Q8NEZ3 1342 aa13.62□□□□□ -0.23
RNF4-216ENST00000511859 DMDP11532 3685 aa13.61□□□□□ -0.23
RNF4-216ENST00000511859 STXBP3O00186 592 aa13.61□□□□□ -0.23
RNF4-216ENST00000511859 NMT2O60551 498 aa13.61□□□□□ -0.23
RNF4-216ENST00000511859 SMAD4Q13485 552 aaKnown RBP13.61□□□□□ -0.23
RNF4-216ENST00000511859 MFSD10Q14728 455 aa13.61□□□□□ -0.23
RNF4-216ENST00000511859 SEPT14Q6ZU15 432 aa13.61□□□□□ -0.23
RNF4-216ENST00000511859 RASGRP2Q7LDG7 609 aa13.61□□□□□ -0.23
RNF4-216ENST00000511859 CHST3Q7LGC8 479 aa13.61□□□□□ -0.23
RNF4-216ENST00000511859 IWS1Q96ST2 819 aa13.61□□□□□ -0.23
RNF4-216ENST00000511859 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.61□□□□□ -0.23
RNF4-216ENST00000511859 C5orf67F2Z3F1 127 aa13.6□□□□□ -0.23
RNF4-216ENST00000511859 PPFIA4O75335 1185 aa13.6□□□□□ -0.23
RNF4-216ENST00000511859 F2P00734 622 aa13.6□□□□□ -0.23
RNF4-216ENST00000511859 LAMC2Q13753 1193 aa13.6□□□□□ -0.23
RNF4-216ENST00000511859 STXBP2Q15833 593 aa13.6□□□□□ -0.23
RNF4-216ENST00000511859 DHX37Q8IY37 1157 aaKnown RBP13.6□□□□□ -0.23
RNF4-216ENST00000511859 NSUN6Q8TEA1 469 aaKnown RBP13.6□□□□□ -0.23
RNF4-216ENST00000511859 SEPT8Q92599 483 aa13.6□□□□□ -0.23
RNF4-216ENST00000511859 WNT8BQ93098 351 aa13.6□□□□□ -0.23
RNF4-216ENST00000511859 ZBTB40Q9NUA8 1239 aa13.6□□□□□ -0.23
RNF4-216ENST00000511859 RWDD3Q9Y3V2 267 aa13.6□□□□□ -0.23
RNF4-216ENST00000511859 COL4A6Q14031 1691 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 RANBP6O60518 1105 aaKnown RBP13.59□□□□□ -0.23
RNF4-216ENST00000511859 UPP2O95045 317 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 TOP1P11387 765 aaKnown RBP13.59□□□□□ -0.23
RNF4-216ENST00000511859 THPOP40225 353 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 ZXDAP98168 799 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 DLX2Q07687 328 aaPredicted RBP13.59□□□□□ -0.23
RNF4-216ENST00000511859 HYAL1Q12794 435 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 SERINC5Q86VE9 423 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 FBXL6Q8N531 539 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 PPTC7Q8NI37 304 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 GPATCH3Q96I76 525 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 CHMP4BQ9H444 224 aaKnown RBP13.59□□□□□ -0.23
RNF4-216ENST00000511859 GPCPD1Q9NPB8 672 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 CD207Q9UJ71 328 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 DDX41Q9UJV9 622 aaKnown RBP13.59□□□□□ -0.23
RNF4-216ENST00000511859 DDX19BQ9UMR2 479 aa13.59□□□□□ -0.23
RNF4-216ENST00000511859 EYA4O95677 639 aa13.58□□□□□ -0.23
RNF4-216ENST00000511859 BMPR1AP36894 532 aa13.58□□□□□ -0.23
RNF4-216ENST00000511859 ZNF200P98182 395 aaPredicted RBP13.58□□□□□ -0.23
RNF4-216ENST00000511859 CLUL1Q15846 466 aa13.58□□□□□ -0.23
RNF4-216ENST00000511859 FIBCD1Q8N539 461 aa13.58□□□□□ -0.23
RNF4-216ENST00000511859 IL17RAQ96F46 866 aa13.58□□□□□ -0.23
RNF4-216ENST00000511859 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.23
RNF4-216ENST00000511859 C11orf84Q9BUA3 381 aaPredicted RBP13.58□□□□□ -0.23
RNF4-216ENST00000511859 DCHS1Q96JQ0 3298 aa13.58□□□□□ -0.23
RNF4-216ENST00000511859 FRMPD2Q68DX3 1309 aaPredicted RBP13.58□□□□□ -0.24
RNF4-216ENST00000511859 ATG2AQ2TAZ0 1938 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 ORC4O43929 436 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 CAND2O75155 1236 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 EIF3JO75822 258 aaKnown RBP13.58□□□□□ -0.24
RNF4-216ENST00000511859 CTNNB1P35222 781 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 CTDSPL2Q05D32 466 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 ADAM15Q13444 863 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 APBB2Q92870 758 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 PPP2R3CQ969Q6 453 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 TAAR1Q96RJ0 339 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 IFIH1Q9BYX4 1025 aaKnown RBP13.58□□□□□ -0.24
RNF4-216ENST00000511859 INCENPQ9NQS7 918 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 TCP11L1Q9NUJ3 509 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 ANAPC4Q9UJX5 808 aa13.58□□□□□ -0.24
RNF4-216ENST00000511859 KAT6AQ92794 2004 aa13.57□□□□□ -0.24
RNF4-216ENST00000511859 VPS13AQ96RL7 3174 aa13.57□□□□□ -0.24
RNF4-216ENST00000511859 KMT2EQ8IZD2 1858 aa13.57□□□□□ -0.24
RNF4-216ENST00000511859 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.57□□□□□ -0.24
RNF4-216ENST00000511859 LOC730098B7Z3J9 87 aa13.57□□□□□ -0.24
RNF4-216ENST00000511859 FGRP09769 529 aa13.57□□□□□ -0.24
RNF4-216ENST00000511859 ZNF286BP0CG31 522 aa13.57□□□□□ -0.24
RNF4-216ENST00000511859 PDHBP11177 359 aa13.57□□□□□ -0.24
RNF4-216ENST00000511859 HOXD8P13378 290 aaPredicted RBP13.57□□□□□ -0.24
RNF4-216ENST00000511859 NUBP1P53384 320 aa13.57□□□□□ -0.24
RNF4-216ENST00000511859 CBX2Q14781 532 aaPredicted RBP13.57□□□□□ -0.24
RNF4-216ENST00000511859 ATOH1Q92858 354 aaPredicted RBP13.57□□□□□ -0.24
RNF4-216ENST00000511859 TTC14Q96N46 770 aa13.57□□□□□ -0.24
RNF4-216ENST00000511859 RMDN3Q96TC7 470 aa13.57□□□□□ -0.24
RNF4-216ENST00000511859 SEC62Q99442 399 aaKnown RBP13.57□□□□□ -0.24
RNF4-216ENST00000511859 IGFLR1Q9H665 355 aa13.57□□□□□ -0.24
RNF4-216ENST00000511859 GRM6O15303 877 aa13.56□□□□□ -0.24
RNF4-216ENST00000511859 SMARCA5O60264 1052 aaPredicted RBP13.56□□□□□ -0.24
RNF4-216ENST00000511859 TBX10O75333 385 aa13.56□□□□□ -0.24
RNF4-216ENST00000511859 SIGLEC14Q08ET2 396 aa13.56□□□□□ -0.24
RNF4-216ENST00000511859 HIC1Q14526 733 aa13.56□□□□□ -0.24
RNF4-216ENST00000511859 USH1GQ495M9 461 aa13.56□□□□□ -0.24
RNF4-216ENST00000511859 KCNV1Q6PIU1 500 aa13.56□□□□□ -0.24
RNF4-216ENST00000511859 MCF2L2Q86YR7 1114 aa13.56□□□□□ -0.24
RNF4-216ENST00000511859 SYTL5Q8TDW5 730 aaPredicted RBP13.56□□□□□ -0.24
RNF4-216ENST00000511859 CLP1Q92989 425 aaKnown RBP13.56□□□□□ -0.24
RNF4-216ENST00000511859 ATP6V0A1Q93050 837 aa13.56□□□□□ -0.24
RNF4-216ENST00000511859 MSLNLQ96KJ4 702 aa13.56□□□□□ -0.24
RNF4-216ENST00000511859 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms