RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SRGAP3O43295 1099 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 CYBBP04839 570 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 KIR3DS1Q14943 382 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 GNPTABQ3T906 1256 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 PLEKHN1Q494U1 663 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 AXDND1Q5T1B0 1012 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 TDRD10Q5VZ19 366 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 LARP1BQ659C4 914 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 VHLLQ6RSH7 139 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 PAQR3Q6TCH7 311 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 FAM178BQ8IXR5 827 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 TMEM52Q8NDY8 209 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 SLC12A9Q9BXP2 914 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 KRTAP9-3Q9BYQ3 159 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 USP35Q9P2H5 1018 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 FHOD1Q9Y613 1164 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 IRS2Q9Y4H2 1338 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 ATRNO75882 1429 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 PLXNC1O60486 1568 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 KDM5AP29375 1690 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 CAMTA1Q9Y6Y1 1673 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 SHOXO15266 292 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 FGF10O15520 208 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 CBFA2T2O43439 604 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 IGSF3O75054 1194 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 TBC1D8O95759 1140 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 TP53P04637 393 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 CELA3BP08861 270 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 ITGA4P13612 1032 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 HSPA6P17066 643 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 POU4F1Q01851 419 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 MVKQ03426 396 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 SERINC3Q13530 473 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 NCAPHQ15003 741 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 DDR2Q16832 855 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 DCAF15Q66K64 600 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 KIAA1211LQ6NV74 962 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 GGT6Q6P531 493 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 C6orf15Q6UXA7 325 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 DBX2Q6ZNG2 339 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 BORCS6Q96GS4 357 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 TEPSINQ96N21 525 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 TRIM55Q9BYV6 548 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 GP6Q9HCN6 339 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 PDLIM7Q9NR12 457 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 FAM86C1Q9NVL1 165 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 RALGAPBQ86X10 1494 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 SPHKAPQ2M3C7 1700 aa5.37□□□□□ -1.55
TOPBP1-208ENST00000511439 A0A087WZG4 1122 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 B2RBV5 119 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 H0Y8X5 98 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 DDAH1O94760 285 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 GJB6O95452 261 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 CD247P20963 164 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 TCEAL1Q15170 157 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 FRMD5Q7Z6J6 570 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 NLGN2Q8NFZ4 835 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 PMFBP1Q8TBY8 1022 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 HAUS7Q99871 368 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 RNF38Q9H0F5 515 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 ST7Q9NRC1 585 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 SIRPGQ9P1W8 387 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 MSRB2Q9Y3D2 182 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 MIA2Q96PC5 1412 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 SETD5Q9C0A6 1442 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 SAMD9Q5K651 1589 aa5.36□□□□□ -1.55
TOPBP1-208ENST00000511439 UTRNP46939 3433 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 U2SURPO15042 1029 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 DBHP09172 617 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 KCNA6P17658 529 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 IGFBP6P24592 240 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 ZNF445P59923 1031 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 ZNF200P98182 395 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 VMACQ2NL98 169 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 BICRALQ6AI39 1079 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 MRM1Q6IN84 353 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 CABP7Q86V35 215 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 FIBCD1Q8N539 461 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 FEZF2Q8TBJ5 459 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 KRTAP4-5Q9BYR2 181 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 KLHL25Q9H0H3 589 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 SUSD2Q9UGT4 822 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 DIS3Q9Y2L1 958 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 ZNF451Q9Y4E5 1061 aa5.35□□□□□ -1.55
TOPBP1-208ENST00000511439 A2MP01023 1474 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 ANKRD34BA5PLL1 514 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 EPHX1P07099 455 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 L1CAMP32004 1257 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 KCNC1P48547 511 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 ZNF143P52747 638 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 NCKAP1LP55160 1127 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 HEATR6Q6AI08 1181 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 ZDHHC14Q8IZN3 488 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 BRF1Q92994 677 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 MKL1Q969V6 931 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 PTCHD1Q96NR3 888 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 FCRL3Q96P31 734 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 LNPKQ9C0E8 428 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 SPON1Q9HCB6 807 aa5.34□□□□□ -1.55
TOPBP1-208ENST00000511439 DBR1Q9UK59 544 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms