RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 PRRT2Q7Z6L0 340 aaPredicted RBP17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 GPR161Q8N6U8 529 aaKnown RBP17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 ZNF713Q8N859 430 aaPredicted RBP17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 PRPF38AQ8NAV1 312 aaKnown RBP17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 CCDC12Q8WUD4 166 aaPredicted RBP17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 KCNH4Q9UQ05 1017 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 RPN1P04843 607 aaKnown RBP17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 PPP2R3AQ06190 1150 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 KRT31Q15323 416 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 TMCO3Q6UWJ1 677 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 TMTC1Q8IUR5 882 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 COA7Q96BR5 231 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 MTRQ99707 1265 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 PASKQ96RG2 1323 aa17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 SOWAHDA6NJG2 315 aa17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 ZRANB2O95218 330 aaKnown RBP eCLIP17.94■□□□□ 0.461e-11■■□□□ 13.3
SQSTM1-213ENST00000510187 YY1P25490 414 aa17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 GJA5P36382 358 aa17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 HUNKP57058 714 aa17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 KCNB1Q14721 858 aa17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 GADL1Q6ZQY3 521 aa17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 RSRC2Q7L4I2 434 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 SMYD4Q8IYR2 804 aaPredicted RBP17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 AMNQ9BXJ7 453 aa17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 RANBP17Q9H2T7 1088 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 MRPL44Q9H9J2 332 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 MAGEF1Q9HAY2 307 aa17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 DISC1Q9NRI5 854 aa17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 PPP1R9AQ9ULJ8 1098 aa17.94■□□□□ 0.46
SQSTM1-213ENST00000510187 CCDC194A0A1B0GVG4 234 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 GYPCP04921 128 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 PRPHP41219 470 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 STAT6P42226 847 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 COPB1P53618 953 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 TUBB4BP68371 445 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 TREML2Q5T2D2 321 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 RAD9BQ6WBX8 426 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 FBXO11Q86XK2 927 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 PROCA1Q8NCQ7 364 aaPredicted RBP17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 NELFBQ8WX92 580 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 RABGGTAQ92696 567 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 DESI2Q9BSY9 194 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 CCSER1Q9C0I3 900 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 BLZF1Q9H2G9 400 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 PCDHA1Q9Y5I3 950 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 FHOD1Q9Y613 1164 aa17.93■□□□□ 0.46
SQSTM1-213ENST00000510187 SMCO2A6NFE2 343 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 USP17L15C9J2P7 530 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 USP17L13C9JLJ4 530 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 USP17L11C9JVI0 530 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 USP17L18D6R9N7 530 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 USP17L22D6RA61 530 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 USP17L17D6RBQ6 530 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 USP17L19D6RCP7 530 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 USP17L20D6RJB6 530 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 N4BP3O15049 544 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 KIF5CO60282 957 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 TOMM70O94826 608 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 USP17L24Q0WX57 530 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 SNAPC2Q13487 334 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 TCP11X2Q5H9J9 407 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 JAKMIP3Q5VZ66 844 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 CCDC174Q6PII3 467 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 DTHD1Q6ZMT9 781 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 CATSPERGQ6ZRH7 1159 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 WNK4Q96J92 1243 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 CUEDC2Q9H467 287 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 KCNJ18B7U540 433 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 PNMA6AP0CW24 399 aaPredicted RBP17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 CASP14P31944 242 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 MKRN3Q13064 507 aaKnown RBP17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 KCNJ12Q14500 433 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 COG2Q14746 738 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 MTF1Q14872 753 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 KARSQ15046 597 aaKnown RBP17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 USH1GQ495M9 461 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 PPP1R18Q6NYC8 613 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 GOLGA1Q92805 767 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 ZMYND12Q9H0C1 365 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 C6orf50Q9HD87 102 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 MYO1AQ9UBC5 1043 aa17.92■□□□□ 0.46
SQSTM1-213ENST00000510187 TRPM7Q96QT4 1865 aa17.91■□□□□ 0.46
SQSTM1-213ENST00000510187 GNA11P29992 359 aa17.91■□□□□ 0.46
SQSTM1-213ENST00000510187 FASTKD5Q7L8L6 764 aaKnown RBP17.91■□□□□ 0.46
SQSTM1-213ENST00000510187 ADSSL1Q8N142 457 aa17.91■□□□□ 0.46
SQSTM1-213ENST00000510187 NOC3LQ8WTT2 800 aaKnown RBP17.91■□□□□ 0.46
SQSTM1-213ENST00000510187 PCDHA6Q9UN73 950 aa17.91■□□□□ 0.46
SQSTM1-213ENST00000510187 CTDP1Q9Y5B0 961 aaPredicted RBP17.91■□□□□ 0.46
SQSTM1-213ENST00000510187 PCDHA8Q9Y5H6 950 aa17.91■□□□□ 0.46
SQSTM1-213ENST00000510187 PTPRFP10586 1907 aa17.9■□□□□ 0.46
SQSTM1-213ENST00000510187 ESYT2A0FGR8 921 aa17.9■□□□□ 0.46
SQSTM1-213ENST00000510187 FXR1P51114 621 aaKnown RBP eCLIP17.9■□□□□ 0.464e-6■□□□□ 9.8
SQSTM1-213ENST00000510187 STIM1Q13586 685 aa17.9■□□□□ 0.46
SQSTM1-213ENST00000510187 CYP26C1Q6V0L0 522 aa17.9■□□□□ 0.46
SQSTM1-213ENST00000510187 SAPCD2Q86UD0 394 aa17.9■□□□□ 0.46
SQSTM1-213ENST00000510187 ZNF784Q8NCA9 323 aaPredicted RBP17.9■□□□□ 0.46
SQSTM1-213ENST00000510187 STAMQ92783 540 aa17.9■□□□□ 0.46
SQSTM1-213ENST00000510187 ATG4CQ96DT6 458 aa17.9■□□□□ 0.46
SQSTM1-213ENST00000510187 AK8Q96MA6 479 aa17.9■□□□□ 0.46
SQSTM1-213ENST00000510187 SLC38A10Q9HBR0 1119 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms