RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 FOXD4L6Q3SYB3 417 aaPredicted RBP6.2□□□□□ -1.42
NEK1-204ENST00000509912 FOXD4L3Q6VB84 417 aaPredicted RBP6.2□□□□□ -1.42
NEK1-204ENST00000509912 ZNF417Q8TAU3 575 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 RUNDC1Q96C34 613 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 ZNF587Q96SQ5 575 aaPredicted RBP6.2□□□□□ -1.42
NEK1-204ENST00000509912 CEP89Q96ST8 783 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 ISCA1Q9BUE6 129 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 ABCC12Q96J65 1359 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 SLX4Q8IY92 1834 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 PRODHO43272 600 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 PPFIA3O75145 1194 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 RASGRP1O95267 797 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 WISP1O95388 367 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 NEK4P51957 841 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 PPP2R5DQ14738 602 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 PPP1R42Q7Z4L9 355 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 BRAPQ7Z569 592 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 C2CD5Q86YS7 1000 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 WDR63Q8IWG1 891 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 DMRTC2Q8IXT2 367 aaPredicted RBP6.2□□□□□ -1.42
NEK1-204ENST00000509912 OR6P1Q8NGX9 317 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 BTN2A2Q8WVV5 523 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 MPHOSPH6Q99547 160 aaKnown RBP6.2□□□□□ -1.42
NEK1-204ENST00000509912 PHAXQ9H814 394 aaKnown RBP6.2□□□□□ -1.42
NEK1-204ENST00000509912 HYPKQ9NX55 129 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 ZBTB1Q9Y2K1 713 aa6.2□□□□□ -1.42
NEK1-204ENST00000509912 RASSF10A6NK89 507 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 VEGFAP15692 232 aaPredicted RBP6.19□□□□□ -1.42
NEK1-204ENST00000509912 TEFQ10587 303 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 TTLL4Q14679 1199 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 PRR5LQ6MZQ0 368 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 ZNF227Q86WZ6 799 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 GPC2Q8N158 579 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 RIN3Q8TB24 985 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 TNFRSF25Q93038 417 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 EMILIN2Q9BXX0 1053 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 ASPSCR1Q9BZE9 553 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 BRINP2Q9C0B6 783 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 MKRN2Q9H000 416 aaKnown RBP6.19□□□□□ -1.42
NEK1-204ENST00000509912 VTA1Q9NP79 307 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 DDX21Q9NR30 783 aaKnown RBP eCLIP6.19□□□□□ -1.42
NEK1-204ENST00000509912 ZNF214Q9UL59 606 aaPredicted RBP6.19□□□□□ -1.42
NEK1-204ENST00000509912 TNPO3Q9Y5L0 923 aaKnown RBP6.19□□□□□ -1.42
NEK1-204ENST00000509912 CYP11A1P05108 521 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 HTRA3P83110 453 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 LBRQ14739 615 aaKnown RBP6.19□□□□□ -1.42
NEK1-204ENST00000509912 ZC3H12AQ5D1E8 599 aaKnown RBP6.19□□□□□ -1.42
NEK1-204ENST00000509912 PRAMEF13Q5VWM6 474 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 C19orf47Q8N9M1 422 aaKnown RBP6.19□□□□□ -1.42
NEK1-204ENST00000509912 KISS1RQ969F8 398 aaPredicted RBP6.19□□□□□ -1.42
NEK1-204ENST00000509912 RBM17Q96I25 401 aaKnown RBP6.19□□□□□ -1.42
NEK1-204ENST00000509912 YIPF4Q9BSR8 244 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 PLAAQ9Y263 795 aa6.19□□□□□ -1.42
NEK1-204ENST00000509912 BTBD11A6QL63 1104 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 NEFMP07197 916 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 ADH6P28332 368 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 SLC39A6Q13433 755 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 SETDB1Q15047 1291 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 SCLYQ96I15 445 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 CAAP1Q9H8G2 361 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 CNTNAP1P78357 1384 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 DNAJC8O75937 253 aaPredicted RBP6.18□□□□□ -1.42
NEK1-204ENST00000509912 AP3B2Q13367 1082 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 CYFIP1Q7L576 1253 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 AFAP1L2Q8N4X5 818 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 RTF1Q92541 710 aaKnown RBP6.18□□□□□ -1.42
NEK1-204ENST00000509912 ZCCHC17Q9NP64 241 aaKnown RBP6.18□□□□□ -1.42
NEK1-204ENST00000509912 RAD18Q9NS91 495 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 PHF24Q9UPV7 400 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 UTYO14607 1347 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 TRBV23-1A0A0A0MS06 115 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 A0A0U1RQG5 324 aaPredicted RBP6.18□□□□□ -1.42
NEK1-204ENST00000509912 KCNH1O95259 989 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 NTSR2O95665 410 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 MAP2K2P36507 400 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 EXOSC10Q01780 885 aaKnown RBP6.18□□□□□ -1.42
NEK1-204ENST00000509912 MCL1Q07820 350 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 PLBD2Q8NHP8 589 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 DHRS4Q9BTZ2 278 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 CACNA2D2Q9NY47 1150 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 SUCOQ9UBS9 1254 aaKnown RBP6.18□□□□□ -1.42
NEK1-204ENST00000509912 PCDHGC5Q9Y5F6 944 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 PPP2R3BQ9Y5P8 575 aa6.18□□□□□ -1.42
NEK1-204ENST00000509912 COL2A1P02458 1487 aaPredicted RBP6.18□□□□□ -1.42
NEK1-204ENST00000509912 ZNF891A8MT65 544 aaPredicted RBP6.17□□□□□ -1.42
NEK1-204ENST00000509912 AOC2O75106 756 aa6.17□□□□□ -1.42
NEK1-204ENST00000509912 HMOX1P09601 288 aa6.17□□□□□ -1.42
NEK1-204ENST00000509912 SYCP2LQ5T4T6 812 aa6.17□□□□□ -1.42
NEK1-204ENST00000509912 CDCP2Q5VXM1 449 aa6.17□□□□□ -1.42
NEK1-204ENST00000509912 DIEXFQ68CQ4 756 aaKnown RBP6.17□□□□□ -1.42
NEK1-204ENST00000509912 HEATR6Q6AI08 1181 aaKnown RBP6.17□□□□□ -1.42
NEK1-204ENST00000509912 CCDC144CPQ8IYA2 1237 aa6.17□□□□□ -1.42
NEK1-204ENST00000509912 LRRC47Q8N1G4 583 aaKnown RBP6.17□□□□□ -1.42
NEK1-204ENST00000509912 NXPE1Q8N323 547 aa6.17□□□□□ -1.42
NEK1-204ENST00000509912 ATP6V0A2Q9Y487 856 aa6.17□□□□□ -1.42
NEK1-204ENST00000509912 PDS5AQ29RF7 1337 aaKnown RBP6.17□□□□□ -1.42
NEK1-204ENST00000509912 MYO3BQ8WXR4 1341 aa6.17□□□□□ -1.42
NEK1-204ENST00000509912 SHOXO15266 292 aa6.17□□□□□ -1.42
NEK1-204ENST00000509912 HSPA1AP0DMV8 641 aaKnown RBP6.17□□□□□ -1.42
NEK1-204ENST00000509912 HSPA1BP0DMV9 641 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms