RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 LRRC10BA6NIK2 292 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 PES1O00541 588 aaKnown RBP8.39□□□□□ -1.07
CAST-228ENST00000509903 FANCGO15287 622 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 SMARCA1P28370 1054 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 ATP1A2P50993 1020 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 PICALMQ13492 652 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 KCNB1Q14721 858 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 TCEAL1Q15170 157 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 ZNF394Q53GI3 561 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 RAD9BQ6WBX8 426 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 CABP7Q86V35 215 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 ADSSL1Q8N142 457 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 REXO1Q8N1G1 1221 aaKnown RBP8.39□□□□□ -1.07
CAST-228ENST00000509903 TRIM47Q96LD4 638 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 PIGSQ96S52 555 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 MRPL44Q9H9J2 332 aaKnown RBP8.39□□□□□ -1.07
CAST-228ENST00000509903 LZTFL1Q9NQ48 299 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 KBTBD4Q9NVX7 518 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 ARGLU1Q9NWB6 273 aaPredicted RBP8.39□□□□□ -1.07
CAST-228ENST00000509903 UBR3Q6ZT12 1888 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 EFCAB8A8MWE9 144 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 KIF5CO60282 957 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 HOXA10P31260 410 aaPredicted RBP8.39□□□□□ -1.07
CAST-228ENST00000509903 PSEN2P49810 448 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 FXR1P51114 621 aaKnown RBP eCLIP8.39□□□□□ -1.07
CAST-228ENST00000509903 UBXN1Q04323 297 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 PPP1R18Q6NYC8 613 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 TMC4Q7Z404 712 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 NOP9Q86U38 636 aaKnown RBP8.39□□□□□ -1.07
CAST-228ENST00000509903 TMTC1Q8IUR5 882 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 CRAMP1Q96RY5 1269 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 ZSWIM4Q9H7M6 989 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 MAGEC2Q9UBF1 373 aaPredicted RBP8.39□□□□□ -1.07
CAST-228ENST00000509903 DOLKQ9UPQ8 538 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 DAGLAQ9Y4D2 1042 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 AFF2P51816 1311 aa8.39□□□□□ -1.07
CAST-228ENST00000509903 TRIM49BA6NDI0 452 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 F8W031 263 aaPredicted RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 hCG_1984214I3L0E3 225 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 PPEF1O14829 653 aaPredicted RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 RIMBP2O15034 1052 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 TADA3O75528 432 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 RHOBTB3O94955 611 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 H2AFXP16104 143 aaPredicted RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 PLCG1P19174 1290 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 PPP2R3AQ06190 1150 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 TXNRD1Q16881 649 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 SLC27A3Q5K4L6 730 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 JAKMIP3Q5VZ66 844 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 KRT222Q8N1A0 295 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 ZNF713Q8N859 430 aaPredicted RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 TBCKQ8TEA7 893 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 ZBED2Q9BTP6 218 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 UBA5Q9GZZ9 404 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 ABHD10Q9NUJ1 306 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 EXOC1Q9NV70 894 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 DMGDHQ9UI17 866 aaKnown RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 MRFAP1Q9Y605 127 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 MYH8P13535 1937 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 FRMPD2Q68DX3 1309 aaPredicted RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 ESYT2A0FGR8 921 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 KLRC4O43908 158 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 PDHBP11177 359 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 EEF1GP26641 437 aaKnown RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 KRT9P35527 623 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 TECP42680 631 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 ASIC1P78348 528 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 AMPD3Q01432 767 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 DDR1Q08345 913 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 ORC2Q13416 577 aaPredicted RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 COL19A1Q14993 1142 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 MAP7D1Q3KQU3 841 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 ASPRV1Q53RT3 343 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 SDE2Q6IQ49 451 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 CYP26C1Q6V0L0 522 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 JAZF1Q86VZ6 243 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 TRIM50Q86XT4 487 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 LRRC47Q8N1G4 583 aaKnown RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 GIMAP8Q8ND71 665 aaPredicted RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 KIFC2Q96AC6 838 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 CALML4Q96GE6 196 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 COA1Q9GZY4 146 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 THAP9Q9H5L6 903 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 KLHL42Q9P2K6 505 aa8.38□□□□□ -1.07
CAST-228ENST00000509903 TRPC5Q9UL62 973 aaPredicted RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 TTF2Q9UNY4 1162 aaKnown RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 TMA7Q9Y2S6 64 aaKnown RBP8.38□□□□□ -1.07
CAST-228ENST00000509903 BICDL2A1A5D9 508 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 LGALS16A8MUM7 142 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 HAX1O00165 279 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 POLRMTO00411 1230 aaKnown RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 GPR182O15218 404 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 CLCN6P51797 869 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 ADCY7P51828 1080 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 PMS1P54277 932 aaKnown RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 EIF6P56537 245 aaKnown RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 RACK1P63244 317 aaKnown RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 DSC3Q14574 896 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 DPP8Q6V1X1 898 aaPredicted RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 SP8Q8IXZ3 490 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms