RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 TTI2Q6NXR4 508 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 FCHSD1Q86WN1 690 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 RPAP3Q9H6T3 665 aaPredicted RBP13.98□□□□□ -0.17
PRDM16-205ENST00000509860 BCAS3Q9H6U6 928 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 RIPK3Q9Y572 518 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 PCDHA2Q9Y5H9 948 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 KIAA1217Q5T5P2 1943 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 E9PMD0 336 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 SPP2Q13103 211 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 CEP135Q66GS9 1140 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 B3GNT9Q6UX72 402 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 CATSPER3Q86XQ3 398 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.98□□□□□ -0.17
PRDM16-205ENST00000509860 PURBQ96QR8 312 aaKnown RBP13.98□□□□□ -0.17
PRDM16-205ENST00000509860 ADD3Q9UEY8 706 aaKnown RBP13.98□□□□□ -0.17
PRDM16-205ENST00000509860 DACH1Q9UI36 760 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 PPP1R9AQ9ULJ8 1098 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 NPHP3-ACAD11A0A0J9YXS1 232 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 OFD1O75665 1012 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 BACE1P56817 501 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 NOLC1Q14978 699 aaKnown RBP eCLIP13.98□□□□□ -0.17
PRDM16-205ENST00000509860 HOOK2Q96ED9 719 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 TMX1Q9H3N1 280 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 GINM1Q9NU53 330 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 WRAP73Q9P2S5 460 aaPredicted RBP13.98□□□□□ -0.17
PRDM16-205ENST00000509860 STK17AQ9UEE5 414 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 ABCB11O95342 1321 aa13.98□□□□□ -0.17
PRDM16-205ENST00000509860 SPDYE3A6NKU9 549 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 ADM5C9JUS6 153 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 KIF20AO95235 890 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 FOSP01100 380 aaPredicted RBP13.97□□□□□ -0.17
PRDM16-205ENST00000509860 SLC12A3P55017 1021 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 FEZ1Q99689 392 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 RAVER2Q9HCJ3 691 aaKnown RBP13.97□□□□□ -0.17
PRDM16-205ENST00000509860 IMPACTQ9P2X3 320 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 ADAMTS5Q9UNA0 930 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 POTEFA5A3E0 1075 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 POTEIP0CG38 1075 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 PAK1Q13153 545 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 DHX8Q14562 1220 aaKnown RBP13.97□□□□□ -0.17
PRDM16-205ENST00000509860 TMEM266Q2M3C6 531 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 COBLL1Q53SF7 1204 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 NOL9Q5SY16 702 aaKnown RBP13.97□□□□□ -0.17
PRDM16-205ENST00000509860 POTEGQ6S5H5 508 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 SEMA6BQ9H3T3 888 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 AFG3L2Q9Y4W6 797 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 TBX3O15119 743 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 PSMD10O75832 226 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.97□□□□□ -0.17
PRDM16-205ENST00000509860 PRPF38AQ8NAV1 312 aaKnown RBP13.97□□□□□ -0.17
PRDM16-205ENST00000509860 SNCAIPQ9Y6H5 919 aa13.97□□□□□ -0.17
PRDM16-205ENST00000509860 GOLGA6L6A8MZA4 724 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 GCOM1H8Y6P7 765 aaPredicted RBP13.96□□□□□ -0.17
PRDM16-205ENST00000509860 SERPINC1P01008 464 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 POLR2MP0CAP2 368 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 ARP10275 920 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 ITGB5P18084 799 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 SLC5A5Q92911 643 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 C12orf42Q96LP6 360 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 RMND1Q9NWS8 449 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 CCPG1Q9ULG6 757 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 PITPNM2Q9BZ72 1349 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 VWA5AO00534 786 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 TPM3P06753 285 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 ZNF280CQ8ND82 737 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 RASSF8Q8NHQ8 419 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 DDX12PQ92771 950 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 ATG4CQ96DT6 458 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 CALML4Q96GE6 196 aa13.96□□□□□ -0.17
PRDM16-205ENST00000509860 LRRC10BA6NIK2 292 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 KRT31Q15323 416 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 OTOP1Q7RTM1 612 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 DYMQ7RTS9 669 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 NAP1L4Q99733 375 aaKnown RBP13.95□□□□□ -0.18
PRDM16-205ENST00000509860 RNF181Q9P0P0 153 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 LIMA1Q9UHB6 759 aaKnown RBP13.95□□□□□ -0.18
PRDM16-205ENST00000509860 KIAA1024Q9UPX6 916 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 MRPS9P82933 396 aaKnown RBP13.95□□□□□ -0.18
PRDM16-205ENST00000509860 KRT79Q5XKE5 535 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 ANKRD40Q6AI12 368 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 TANGO6Q9C0B7 1094 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 MRPL11Q9Y3B7 192 aaKnown RBP13.95□□□□□ -0.18
PRDM16-205ENST00000509860 RNF225M0QZC1 329 aaPredicted RBP13.95□□□□□ -0.18
PRDM16-205ENST00000509860 HMGCS2P54868 508 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 ASIC1P78348 528 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 MCTP2Q6DN12 878 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 UNC13DQ70J99 1090 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 SLFN12Q8IYM2 578 aa13.95□□□□□ -0.18
PRDM16-205ENST00000509860 FRMD3A2A2Y4 597 aa13.94□□□□□ -0.18
PRDM16-205ENST00000509860 PEX10O60683 326 aa13.94□□□□□ -0.18
PRDM16-205ENST00000509860 CCT6AP40227 531 aaKnown RBP13.94□□□□□ -0.18
PRDM16-205ENST00000509860 PDE4DQ08499 809 aa13.94□□□□□ -0.18
PRDM16-205ENST00000509860 SV2BQ7L1I2 683 aa13.94□□□□□ -0.18
PRDM16-205ENST00000509860 ZNF592Q92610 1267 aa13.94□□□□□ -0.18
PRDM16-205ENST00000509860 PPP2R3BQ9Y5P8 575 aa13.94□□□□□ -0.18
PRDM16-205ENST00000509860 ZHX2Q9Y6X8 837 aa13.94□□□□□ -0.18
PRDM16-205ENST00000509860 ARID2Q68CP9 1835 aa13.94□□□□□ -0.18
PRDM16-205ENST00000509860 LOXHD1Q8IVV2 1947 aa13.94□□□□□ -0.18
PRDM16-205ENST00000509860 MEIS1O00470 390 aa13.94□□□□□ -0.18
PRDM16-205ENST00000509860 FLOT1O75955 427 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms