RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	SLC25A27	O95847	323 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	PARP1	P09874	1014 aa	Known RBP	11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	IL9	P15248	144 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	CAST	P20810	708 aa	Known RBP	11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	KIF5B	P33176	963 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	GNAQ	P50148	359 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	TROAP	Q12815	778 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	NFXL1	Q6ZNB6	911 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	CHST3	Q7LGC8	479 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	SHCBP1	Q8NEM2	672 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	NUP133	Q8WUM0	1156 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	MAML3	Q96JK9	1138 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	LZTS2	Q9BRK4	669 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	MAF1	Q9H063	256 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	SLC4A7	Q9Y6M7	1214 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	PALM3	A6NDB9	673 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	SMAP	O00193	183 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	TAL1	P17542	331 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	RBM25	P49756	843 aa	Known RBP	11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	PRSS12	P56730	875 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	EVC	P57679	992 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	FGD1	P98174	961 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	TRAF1	Q13077	416 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	IK	Q13123	557 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	GRB10	Q13322	594 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	CCDC96	Q2M329	555 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	KCTD1	Q719H9	257 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	FAM126B	Q8IXS8	530 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	KLHDC9	Q8NEP7	349 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	VWCE	Q96DN2	955 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	NUP88	Q99567	741 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	SLC38A10	Q9HBR0	1119 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	SLC12A7	Q9Y666	1083 aa		11.92	□□□□□ -0.5
PTPN20-222	ENST00000509774	UMODL1	Q5DID0	1318 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	SYNRG	Q9UMZ2	1314 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	ATP2A2	P16615	1042 aa	Known RBP	11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	STAT3	P40763	770 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	GRM4	Q14833	912 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	ANKRD1	Q15327	319 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	KCNA10	Q16322	511 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	LEXM	Q3ZCV2	418 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	RIOX2	Q8IUF8	465 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	ZNF654	Q8IZM8	581 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	CTCFL	Q8NI51	663 aa	Predicted RBP	11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	ARNTL2	Q8WYA1	636 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	KIFC2	Q96AC6	838 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	ATG4C	Q96DT6	458 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	BACH2	Q9BYV9	841 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	C22orf23	Q9BZE7	217 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	SPATC1L	Q9H0A9	340 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	MROH8	Q9H579	483 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	UBE2Z	Q9H832	354 aa	Predicted RBP	11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	FBXO28	Q9NVF7	368 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	NRBP1	Q9UHY1	535 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	BAHCC1	Q9P281	2608 aa		11.91	□□□□□ -0.5
PTPN20-222	ENST00000509774	ELP1	O95163	1332 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	CCDC196	A0A1B0GTZ2	297 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	MYADML2	A6NDP7	307 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	MOXD2P	A6NHM9	499 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	KLRF2	D3W0D1	207 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	KRT37	O76014	449 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	CD4	P01730	458 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	ERCC3	P19447	782 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	TAP1	Q03518	808 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	TMEM132B	Q14DG7	1078 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	TKFC	Q3LXA3	575 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	SYDE2	Q5VT97	1194 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	APOA5	Q6Q788	366 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774		Q6ZUG5	572 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	ERMP1	Q7Z2K6	904 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	SPRED2	Q7Z698	418 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	ABRA	Q8N0Z2	381 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	FANCB	Q8NB91	859 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	REPS2	Q8NFH8	660 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	MFSD14A	Q96MC6	490 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	TEX13B	Q9BXU2	312 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	GPCPD1	Q9NPB8	672 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	RTN4	Q9NQC3	1192 aa	Known RBP	11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	RBM28	Q9NW13	759 aa	Known RBP	11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	SLC5A4	Q9NY91	659 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	MAD2L2	Q9UI95	211 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	PRR12	Q9ULL5	1215 aa		11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	ISY1	Q9ULR0	285 aa	Known RBP	11.9	□□□□□ -0.5
PTPN20-222	ENST00000509774	TET1	Q8NFU7	2136 aa		11.89	□□□□□ -0.51
PTPN20-222	ENST00000509774	TPR	P12270	2363 aa	Known RBP	11.89	□□□□□ -0.51
PTPN20-222	ENST00000509774	SI	P14410	1827 aa		11.89	□□□□□ -0.51
PTPN20-222	ENST00000509774	ARVCF	O00192	962 aa		11.89	□□□□□ -0.51
PTPN20-222	ENST00000509774	AKR1A1	P14550	325 aa		11.89	□□□□□ -0.51
PTPN20-222	ENST00000509774	TCF15	Q12870	199 aa		11.89	□□□□□ -0.51
PTPN20-222	ENST00000509774	TTBK2	Q6IQ55	1244 aa		11.89	□□□□□ -0.51
PTPN20-222	ENST00000509774	CHST13	Q8NET6	341 aa		11.89	□□□□□ -0.51
PTPN20-222	ENST00000509774	ZNF274	Q96GC6	653 aa	Predicted RBP	11.89	□□□□□ -0.51
PTPN20-222	ENST00000509774	GLT1D1	Q96MS3	346 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms