RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SEMA3FQ13275 785 aa18.53■□□□□ 0.56
PDLIM5-212ENST00000509333 KAT2BQ92831 832 aa18.53■□□□□ 0.56
PDLIM5-212ENST00000509333 NCOA5Q9HCD5 579 aaKnown RBP18.53■□□□□ 0.56
PDLIM5-212ENST00000509333 KIAA1217Q5T5P2 1943 aa18.53■□□□□ 0.56
PDLIM5-212ENST00000509333 hCG_1984214I3L0E3 225 aa18.52■□□□□ 0.56
PDLIM5-212ENST00000509333 TLR3O15455 904 aaKnown RBP18.52■□□□□ 0.56
PDLIM5-212ENST00000509333 MMP3P08254 477 aa18.52■□□□□ 0.56
PDLIM5-212ENST00000509333 HOXD8P13378 290 aaPredicted RBP18.52■□□□□ 0.56
PDLIM5-212ENST00000509333 SCG2P13521 617 aa18.52■□□□□ 0.56
PDLIM5-212ENST00000509333 PPP1R18Q6NYC8 613 aa18.52■□□□□ 0.56
PDLIM5-212ENST00000509333 TDHQ8IZJ6 230 aa18.52■□□□□ 0.56
PDLIM5-212ENST00000509333 ZNF713Q8N859 430 aaPredicted RBP18.52■□□□□ 0.56
PDLIM5-212ENST00000509333 PHKBQ93100 1093 aa18.52■□□□□ 0.56
PDLIM5-212ENST00000509333 GGPS1O95749 300 aa18.51■□□□□ 0.55
PDLIM5-212ENST00000509333 FOSP01100 380 aaPredicted RBP18.51■□□□□ 0.55
PDLIM5-212ENST00000509333 ITGB5P18084 799 aa18.51■□□□□ 0.55
PDLIM5-212ENST00000509333 DGKDQ16760 1214 aa18.51■□□□□ 0.55
PDLIM5-212ENST00000509333 HSDL1Q3SXM5 330 aa18.51■□□□□ 0.55
PDLIM5-212ENST00000509333 GNPTABQ3T906 1256 aa18.51■□□□□ 0.55
PDLIM5-212ENST00000509333 NFRKBQ6P4R8 1299 aa18.51■□□□□ 0.55
PDLIM5-212ENST00000509333 PPTC7Q8NI37 304 aa18.51■□□□□ 0.55
PDLIM5-212ENST00000509333 SENP7Q9BQF6 1050 aa18.51■□□□□ 0.55
PDLIM5-212ENST00000509333 UBIAD1Q9Y5Z9 338 aa18.51■□□□□ 0.55
PDLIM5-212ENST00000509333 SPDYE3A6NKU9 549 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 ADAMTS3O15072 1205 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 B4GALT4O60513 344 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 ATP9AO75110 1047 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 PPFIA3O75145 1194 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 UBA1P22314 1058 aaKnown RBP18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 CLK2P49760 499 aaKnown RBP18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 EPHB4P54760 987 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 NEDD9Q14511 834 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 MFSD5Q6N075 450 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 PPP1R13LQ8WUF5 828 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 SPATA33Q96N06 139 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 RNF26Q9BY78 433 aaPredicted RBP18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 ZMYND12Q9H0C1 365 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 GLT8D2Q9H1C3 349 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 MLXIPQ9HAP2 919 aa18.5■□□□□ 0.55
PDLIM5-212ENST00000509333 MYH7BA7E2Y1 1941 aa18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 MAFGO15525 162 aa18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 FIBPO43427 364 aa18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 SORBS3O60504 671 aa18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 ADCY7P51828 1080 aa18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 AKAP17AQ02040 695 aaKnown RBP18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 PTPN11Q06124 597 aaPredicted RBP18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 SHHQ15465 462 aa18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 LRIT3Q3SXY7 679 aa18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 C16orf59Q7L2K0 433 aa18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 NLRX1Q86UT6 975 aa18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 SLC26A6Q9BXS9 759 aa18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 TRMT13Q9NUP7 481 aaKnown RBP18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 TMEM260Q9NX78 707 aa18.49■□□□□ 0.55
PDLIM5-212ENST00000509333 ESYT2A0FGR8 921 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 HAS3O00219 553 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 SOX1O00570 391 aaPredicted RBP18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 CYP2C18P33260 490 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 C9orf50Q5SZB4 431 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 CYFIP1Q7L576 1253 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 CYP2W1Q8TAV3 490 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 GPRASP2Q96D09 838 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 C16orf70Q9BSU1 422 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 JADE2Q9NQC1 790 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 TPCN1Q9ULQ1 816 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 TELO2Q9Y4R8 837 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 SCN10AQ9Y5Y9 1956 aa18.48■□□□□ 0.55
PDLIM5-212ENST00000509333 SUPT20HL2P0C7V6 817 aa18.47■□□□□ 0.55
PDLIM5-212ENST00000509333 STK3Q13188 491 aa18.47■□□□□ 0.55
PDLIM5-212ENST00000509333 JAKMIP3Q5VZ66 844 aa18.47■□□□□ 0.55
PDLIM5-212ENST00000509333 METTL7BQ6UX53 244 aa18.47■□□□□ 0.55
PDLIM5-212ENST00000509333 SESTD1Q86VW0 696 aa18.47■□□□□ 0.55
PDLIM5-212ENST00000509333 PGBD1Q96JS3 809 aa18.47■□□□□ 0.55
PDLIM5-212ENST00000509333 MXRA8Q9BRK3 442 aa18.47■□□□□ 0.55
PDLIM5-212ENST00000509333 NOC4LQ9BVI4 516 aaKnown RBP18.47■□□□□ 0.55
PDLIM5-212ENST00000509333 C6orf50Q9HD87 102 aa18.47■□□□□ 0.55
PDLIM5-212ENST00000509333 MEIS1O00470 390 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 PFKFB2O60825 505 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 SLC34A2O95436 690 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 CYP2C9P11712 490 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 PSEN2P49810 448 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 CHMP4BP1P59074 171 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 FPGSQ05932 587 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 SSRP1Q08945 709 aaKnown RBP18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 AP3B2Q13367 1082 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 C8orf34Q49A92 452 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 FAM47CQ5HY64 1035 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 GIMAP8Q8ND71 665 aaPredicted RBP18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 CRYGNQ8WXF5 182 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 CDHR1Q96JP9 859 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 GPR20Q99678 358 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 ANO3Q9BYT9 981 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 PPP1R12CQ9BZL4 782 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 EHMT1Q9H9B1 1298 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 SH3GLB2Q9NR46 395 aa18.46■□□□□ 0.55
PDLIM5-212ENST00000509333 F2P00734 622 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 CSF2RAP15509 400 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 KCNA2P16389 499 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 GNA11P29992 359 aa18.45■□□□□ 0.54
PDLIM5-212ENST00000509333 AK2P54819 239 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms