RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CRYGNQ8WXF5 182 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 SGIP1Q9BQI5 828 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 RANBP17Q9H2T7 1088 aaKnown RBP16.61■□□□□ 0.25
PHF3-209ENST00000509330 SH2D4AQ9H788 454 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 LIMA1Q9UHB6 759 aaKnown RBP16.61■□□□□ 0.25
PHF3-209ENST00000509330 A0A0U1RQJ8 604 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 EML1O00423 815 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 TPM2P07951 284 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 ZNF280AP59817 542 aaPredicted RBP16.61■□□□□ 0.25
PHF3-209ENST00000509330 UNC13DQ70J99 1090 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 MYRIPQ8NFW9 859 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 ATRIPQ8WXE1 791 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 PCNTO95613 3336 aa16.6■□□□□ 0.25
PHF3-209ENST00000509330 ZBTB39O15060 712 aa16.6■□□□□ 0.25
PHF3-209ENST00000509330 CTTNQ14247 550 aaKnown RBP16.6■□□□□ 0.25
PHF3-209ENST00000509330 WNK4Q96J92 1243 aa16.6■□□□□ 0.25
PHF3-209ENST00000509330 CNOT6LQ96LI5 555 aaKnown RBP16.6■□□□□ 0.25
PHF3-209ENST00000509330 PURBQ96QR8 312 aaKnown RBP16.6■□□□□ 0.25
PHF3-209ENST00000509330 WRNIP1Q96S55 665 aa16.6■□□□□ 0.25
PHF3-209ENST00000509330 CCNE1P24864 410 aa16.6■□□□□ 0.25
PHF3-209ENST00000509330 MTIF2P46199 727 aaKnown RBP16.6■□□□□ 0.25
PHF3-209ENST00000509330 SPIRE1Q08AE8 756 aa16.6■□□□□ 0.25
PHF3-209ENST00000509330 NYAP1Q6ZVC0 841 aa16.6■□□□□ 0.25
PHF3-209ENST00000509330 PIGOQ8TEQ8 1089 aa16.6■□□□□ 0.25
PHF3-209ENST00000509330 PCMTD1Q96MG8 357 aaPredicted RBP16.6■□□□□ 0.25
PHF3-209ENST00000509330 PANK4Q9NVE7 773 aa16.6■□□□□ 0.25
PHF3-209ENST00000509330 FOSP01100 380 aaPredicted RBP16.59■□□□□ 0.25
PHF3-209ENST00000509330 COASYQ13057 564 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 NAA30Q147X3 362 aaPredicted RBP16.59■□□□□ 0.25
PHF3-209ENST00000509330 SLFN12Q8IYM2 578 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.59■□□□□ 0.25
PHF3-209ENST00000509330 V9GYY5 206 aaPredicted RBP16.59■□□□□ 0.25
PHF3-209ENST00000509330 KIF13BQ9NQT8 1826 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 CYP3A7-CYP3A51PA0A087WV96 503 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 CYP3A7P24462 503 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 PBX1P40424 430 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 EPS15P42566 896 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 HERC4Q5GLZ8 1057 aaPredicted RBP16.59■□□□□ 0.25
PHF3-209ENST00000509330 CCDC112Q8NEF3 446 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 PRIMPOLQ96LW4 560 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 GGA3Q9NZ52 723 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 FEM1BQ9UK73 627 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 FZD9O00144 591 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 SPAG1Q07617 926 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 DNAJC19Q96DA6 116 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 DHTKD1Q96HY7 919 aaPredicted RBP16.59■□□□□ 0.25
PHF3-209ENST00000509330 TUBGCP2Q9BSJ2 902 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 COL20A1Q9P218 1284 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
PHF3-209ENST00000509330 ARP10275 920 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 TPH2Q8IWU9 490 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 NAP1L4Q99733 375 aaKnown RBP16.58■□□□□ 0.24
PHF3-209ENST00000509330 MRPL11Q9Y3B7 192 aaKnown RBP16.58■□□□□ 0.24
PHF3-209ENST00000509330 SFI1A8K8P3 1242 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 MFAP3LO75121 409 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 VCAM1P19320 739 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 Q4G0T1 1027 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 CCDC125Q86Z20 511 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 IL31RAQ8NI17 732 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 SLF1Q9BQI6 1058 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 NT5C3AQ9H0P0 336 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 BHMT2Q9H2M3 363 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 RPAP3Q9H6T3 665 aaPredicted RBP16.58■□□□□ 0.24
PHF3-209ENST00000509330 PPP2R2CQ9Y2T4 447 aa16.58■□□□□ 0.24
PHF3-209ENST00000509330 ZNF536O15090 1300 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 KDM3AQ9Y4C1 1321 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 ARHGAP6O43182 974 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 SPATA31C1P0DKV0 1188 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 RPS12P25398 132 aaKnown RBP16.57■□□□□ 0.24
PHF3-209ENST00000509330 MMP14P50281 582 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 MUM1L1Q5H9M0 696 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 LRCH2Q5VUJ6 765 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 RAD9BQ6WBX8 426 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 FAM160B2Q86V87 743 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 MBOAT7Q96N66 472 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 BMP2KQ9NSY1 1161 aaPredicted RBP16.57■□□□□ 0.24
PHF3-209ENST00000509330 DNAI1Q9UI46 699 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 IGLV3-22A0A075B6J6 115 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 RSPH10B2B2RC85 870 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 RSPH10BP0C881 870 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 CYP11B2P19099 503 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 FAM26FQ5R3K3 315 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 HAUS3Q68CZ6 603 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 NOC4LQ9BVI4 516 aaKnown RBP16.57■□□□□ 0.24
PHF3-209ENST00000509330 LZTFL1Q9NQ48 299 aa16.57■□□□□ 0.24
PHF3-209ENST00000509330 CTDP1Q9Y5B0 961 aaPredicted RBP16.57■□□□□ 0.24
PHF3-209ENST00000509330 BICDL2A1A5D9 508 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 KRT9P35527 623 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 HMGCS2P54868 508 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 ARSHQ5FYA8 562 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 EIF2AK1Q9BQI3 630 aaKnown RBP16.56■□□□□ 0.24
PHF3-209ENST00000509330 IRX2Q9BZI1 471 aaPredicted RBP16.56■□□□□ 0.24
PHF3-209ENST00000509330 EMILIN3Q9NT22 766 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 VAV3Q9UKW4 847 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 EIF2AK2P19525 551 aaKnown RBP16.56■□□□□ 0.24
PHF3-209ENST00000509330 NSMFQ6X4W1 530 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 CCDC155Q8N6L0 562 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 MB21D1Q8N884 522 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 SH2D3AQ9BRG2 576 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms