RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 ZSCAN18Q8TBC5 510 aaPredicted RBP6.32□□□□□ -1.4
NFKB1-208ENST00000509165 DACT3Q96B18 629 aaPredicted RBP6.32□□□□□ -1.4
NFKB1-208ENST00000509165 BCAS3Q9H6U6 928 aa6.32□□□□□ -1.4
NFKB1-208ENST00000509165 GPR27Q9NS67 375 aa6.32□□□□□ -1.4
NFKB1-208ENST00000509165 PFDN2Q9UHV9 154 aa6.32□□□□□ -1.4
NFKB1-208ENST00000509165 DBR1Q9UK59 544 aaKnown RBP6.32□□□□□ -1.4
NFKB1-208ENST00000509165 WDR97A6NE52 1622 aa6.32□□□□□ -1.4
NFKB1-208ENST00000509165 CCDC85CA6NKD9 419 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 H7BY64 318 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 ZBTB7AO95365 584 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 SLC6A11P48066 632 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 LSAMPQ13449 338 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 SLC9A5Q14940 896 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 MROH9Q5TGP6 573 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 FOXB2Q5VYV0 432 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 CIAPIN1Q6FI81 312 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 RSPO2Q6UXX9 243 aaPredicted RBP6.31□□□□□ -1.4
NFKB1-208ENST00000509165 ZBTB38Q8NAP3 1195 aaPredicted RBP6.31□□□□□ -1.4
NFKB1-208ENST00000509165 MKL1Q969V6 931 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 TMEM169Q96HH4 297 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 DEPDC7Q96QD5 511 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 RNF38Q9H0F5 515 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 IRF2BPLQ9H1B7 796 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 SNTG2Q9NY99 539 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 NUDT5Q9UKK9 219 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 PCDHA2Q9Y5H9 948 aa6.31□□□□□ -1.4
NFKB1-208ENST00000509165 MYO1BO43795 1136 aa6.3□□□□□ -1.4
NFKB1-208ENST00000509165 NUAK1O60285 661 aa6.3□□□□□ -1.4
NFKB1-208ENST00000509165 ZSCAN22P10073 491 aaPredicted RBP6.3□□□□□ -1.4
NFKB1-208ENST00000509165 PMLP29590 882 aa6.3□□□□□ -1.4
NFKB1-208ENST00000509165 SSRP1Q08945 709 aaKnown RBP6.3□□□□□ -1.4
NFKB1-208ENST00000509165 TARBP2Q15633 366 aaKnown RBP6.3□□□□□ -1.4
NFKB1-208ENST00000509165 ZNF385BQ569K4 471 aa6.3□□□□□ -1.4
NFKB1-208ENST00000509165 SOGA3Q5TF21 947 aa6.3□□□□□ -1.4
NFKB1-208ENST00000509165 USP53Q70EK8 1073 aa6.3□□□□□ -1.4
NFKB1-208ENST00000509165 NPM2Q86SE8 214 aaKnown RBP6.3□□□□□ -1.4
NFKB1-208ENST00000509165 DCP2Q8IU60 420 aaKnown RBP6.3□□□□□ -1.4
NFKB1-208ENST00000509165 SIAH1Q8IUQ4 282 aa6.3□□□□□ -1.4
NFKB1-208ENST00000509165 DCAF4Q8WV16 495 aa6.3□□□□□ -1.4
NFKB1-208ENST00000509165 ALG3Q92685 438 aa6.3□□□□□ -1.4
NFKB1-208ENST00000509165 TRMT2BQ96GJ1 504 aaKnown RBP6.3□□□□□ -1.4
NFKB1-208ENST00000509165 PHF20Q9BVI0 1012 aa6.3□□□□□ -1.4
NFKB1-208ENST00000509165 NUP160Q12769 1436 aa6.3□□□□□ -1.4
NFKB1-208ENST00000509165 FGD5Q6ZNL6 1462 aa6.29□□□□□ -1.4
NFKB1-208ENST00000509165 FAM153BP0C7A2 387 aa6.29□□□□□ -1.4
NFKB1-208ENST00000509165 NCAM1P13591 858 aa6.29□□□□□ -1.4
NFKB1-208ENST00000509165 PFKLP17858 780 aa6.29□□□□□ -1.4
NFKB1-208ENST00000509165 MC3RP41968 323 aa6.29□□□□□ -1.4
NFKB1-208ENST00000509165 STYK1Q6J9G0 422 aa6.29□□□□□ -1.4
NFKB1-208ENST00000509165 KCNT2Q6UVM3 1135 aa6.29□□□□□ -1.4
NFKB1-208ENST00000509165 ASXL2Q76L83 1435 aa6.29□□□□□ -1.4
NFKB1-208ENST00000509165 JMYQ8N9B5 988 aa6.29□□□□□ -1.4
NFKB1-208ENST00000509165 CPA5Q8WXQ8 436 aa6.29□□□□□ -1.4
NFKB1-208ENST00000509165 SEC14L1Q92503 715 aa6.29□□□□□ -1.4
NFKB1-208ENST00000509165 PPARGC1AQ9UBK2 798 aaKnown RBP6.29□□□□□ -1.4
NFKB1-208ENST00000509165 TOP2BQ02880 1626 aa6.28□□□□□ -1.4
NFKB1-208ENST00000509165 CCDC88BA6NC98 1476 aa6.28□□□□□ -1.4
NFKB1-208ENST00000509165 GRIN2AQ12879 1464 aa6.28□□□□□ -1.4
NFKB1-208ENST00000509165 BLACEA4D250 179 aa6.28□□□□□ -1.4
NFKB1-208ENST00000509165 RFXAPO00287 272 aa6.28□□□□□ -1.4
NFKB1-208ENST00000509165 C6orf222P0C671 652 aaPredicted RBP6.28□□□□□ -1.4
NFKB1-208ENST00000509165 LIMS1P48059 325 aa6.28□□□□□ -1.4
NFKB1-208ENST00000509165 CNKSR3Q6P9H4 555 aa6.28□□□□□ -1.4
NFKB1-208ENST00000509165 PMFBP1Q8TBY8 1022 aa6.28□□□□□ -1.4
NFKB1-208ENST00000509165 EXOC2Q96KP1 924 aa6.28□□□□□ -1.4
NFKB1-208ENST00000509165 DNAJC2Q99543 621 aaKnown RBP6.28□□□□□ -1.4
NFKB1-208ENST00000509165 CLDND1Q9NY35 253 aa6.28□□□□□ -1.4
NFKB1-208ENST00000509165 KDM2BQ8NHM5 1336 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 PRG4Q92954 1404 aaPredicted RBP6.27□□□□□ -1.41
NFKB1-208ENST00000509165 TADA3O75528 432 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 PLA2G1BP04054 148 aaKnown RBP6.27□□□□□ -1.41
NFKB1-208ENST00000509165 HTRA3P83110 453 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 FOXO4P98177 505 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 CAP1Q01518 475 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 IFRD2Q12894 506 aaPredicted RBP6.27□□□□□ -1.41
NFKB1-208ENST00000509165 LONRF2Q1L5Z9 754 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 EMC4Q5J8M3 183 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 FAM209AQ5JX71 171 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 LBX2Q6XYB7 198 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 B3GNT8Q7Z7M8 397 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 MIB1Q86YT6 1006 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 SCUBE1Q8IWY4 988 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 ZFYVE21Q9BQ24 234 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 AP5M1Q9H0R1 490 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 PALD1Q9ULE6 856 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 ADAMTS20P59510 1910 aa6.27□□□□□ -1.41
NFKB1-208ENST00000509165 TRBV23-1A0A0A0MS06 115 aa6.26□□□□□ -1.41
NFKB1-208ENST00000509165 CACNB2Q08289 660 aaPredicted RBP6.26□□□□□ -1.41
NFKB1-208ENST00000509165 FNIP1Q8TF40 1166 aa6.26□□□□□ -1.41
NFKB1-208ENST00000509165 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.26□□□□□ -1.41
NFKB1-208ENST00000509165 KISS1RQ969F8 398 aaPredicted RBP6.26□□□□□ -1.41
NFKB1-208ENST00000509165 CHAMP1Q96JM3 812 aa6.26□□□□□ -1.41
NFKB1-208ENST00000509165 PWWP2AQ96N64 755 aa6.26□□□□□ -1.41
NFKB1-208ENST00000509165 SRPK1Q96SB4 655 aaKnown RBP6.26□□□□□ -1.41
NFKB1-208ENST00000509165 DNAJC7Q99615 494 aa6.26□□□□□ -1.41
NFKB1-208ENST00000509165 ZNF652Q9Y2D9 606 aa6.26□□□□□ -1.41
NFKB1-208ENST00000509165 COA3Q9Y2R0 106 aaPredicted RBP6.26□□□□□ -1.41
NFKB1-208ENST00000509165 PCF11O94913 1555 aaKnown RBP6.26□□□□□ -1.41
NFKB1-208ENST00000509165 C8BP07358 591 aa6.25□□□□□ -1.41
NFKB1-208ENST00000509165 AFF3P51826 1226 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms