RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 CSF2RAP15509 400 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 UBA1P22314 1058 aaKnown RBP9.98□□□□□ -0.81
SNCA-211ENST00000508895 METAP2P50579 478 aaKnown RBP eCLIP9.98□□□□□ -0.81
SNCA-211ENST00000508895 NEK4P51957 841 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 ZNF200P98182 395 aaPredicted RBP9.98□□□□□ -0.81
SNCA-211ENST00000508895 TTLL4Q14679 1199 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 NTRK3Q16288 839 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 TCTN1Q2MV58 587 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 HSDL1Q3SXM5 330 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 DHX38Q92620 1227 aaKnown RBP9.98□□□□□ -0.81
SNCA-211ENST00000508895 WNT8BQ93098 351 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 SCLYQ96I15 445 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.98□□□□□ -0.81
SNCA-211ENST00000508895 OSBPL7Q9BZF2 842 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 ALDH8A1Q9H2A2 487 aaPredicted RBP9.98□□□□□ -0.81
SNCA-211ENST00000508895 UPF2Q9HAU5 1272 aaKnown RBP9.98□□□□□ -0.81
SNCA-211ENST00000508895 SPC25Q9HBM1 224 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 NCOA5Q9HCD5 579 aaKnown RBP9.98□□□□□ -0.81
SNCA-211ENST00000508895 TMEM260Q9NX78 707 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 NAP1L2Q9ULW6 460 aaPredicted RBP9.98□□□□□ -0.81
SNCA-211ENST00000508895 TANC1Q9C0D5 1861 aa9.98□□□□□ -0.81
SNCA-211ENST00000508895 MYH9P35579 1960 aaKnown RBP9.97□□□□□ -0.81
SNCA-211ENST00000508895 CDH23Q9H251 3354 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 A0A1W2PPC1 479 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 GRXCR1A8MXD5 290 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 DCDC2CA8MYV0 355 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 ATP9AO75110 1047 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 EIF3JO75822 258 aaKnown RBP9.97□□□□□ -0.81
SNCA-211ENST00000508895 CD2BP2O95400 341 aaKnown RBP9.97□□□□□ -0.81
SNCA-211ENST00000508895 TIMP1P01033 207 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 GH1P01241 217 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 RAG1P15918 1043 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 PDIA3P30101 505 aaKnown RBP9.97□□□□□ -0.81
SNCA-211ENST00000508895 CCL23P55773 120 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 ST3GAL1Q11201 340 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 GPNMBQ14956 572 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 LRIT3Q3SXY7 679 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 MYSM1Q5VVJ2 828 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 GDF6Q6KF10 455 aaPredicted RBP9.97□□□□□ -0.81
SNCA-211ENST00000508895 SYNE3Q6ZMZ3 975 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 HEATR3Q7Z4Q2 680 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 CYP2W1Q8TAV3 490 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 UIMC1Q96RL1 719 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 MTG1Q9BT17 334 aaPredicted RBP9.97□□□□□ -0.81
SNCA-211ENST00000508895 NOC4LQ9BVI4 516 aaKnown RBP9.97□□□□□ -0.81
SNCA-211ENST00000508895 MAF1Q9H063 256 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 RBM28Q9NW13 759 aaKnown RBP9.97□□□□□ -0.81
SNCA-211ENST00000508895 TPCN1Q9ULQ1 816 aa9.97□□□□□ -0.81
SNCA-211ENST00000508895 SPATA31C2B4DYI2 1134 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 HAS3O00219 553 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 PIK3CDO00329 1044 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 NKRFO15226 690 aaKnown RBP eCLIP9.96□□□□□ -0.82
SNCA-211ENST00000508895 GGPS1O95749 300 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 HOXD8P13378 290 aaPredicted RBP9.96□□□□□ -0.82
SNCA-211ENST00000508895 ITGB5P18084 799 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 CCND2P30279 289 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 GNAQP50148 359 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 CHMP4BP1P59074 171 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 CCT2P78371 535 aaKnown RBP9.96□□□□□ -0.82
SNCA-211ENST00000508895 SCRN1Q12765 414 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 RABEP1Q15276 862 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 TMEM240Q5SV17 173 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 CELF3Q5SZQ8 465 aaKnown RBP9.96□□□□□ -0.82
SNCA-211ENST00000508895 TRIM50Q86XT4 487 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 PHKBQ93100 1093 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 ZNF274Q96GC6 653 aaPredicted RBP9.96□□□□□ -0.82
SNCA-211ENST00000508895 AIFM3Q96NN9 605 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 INPP4AQ96PE3 977 aaPredicted RBP9.96□□□□□ -0.82
SNCA-211ENST00000508895 LBHD1Q9BQE6 289 aaPredicted RBP9.96□□□□□ -0.82
SNCA-211ENST00000508895 LZTS2Q9BRK4 669 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 C16orf70Q9BSU1 422 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 ALG1Q9BT22 464 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 PSTPIP2Q9H939 334 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 PRDM6Q9NQX0 595 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 CXXC1Q9P0U4 656 aaPredicted RBP9.96□□□□□ -0.82
SNCA-211ENST00000508895 PCDHA6Q9UN73 950 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 PCDHA8Q9Y5H6 950 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 MRVI1Q9Y6F6 885 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 SIP14410 1827 aa9.96□□□□□ -0.82
SNCA-211ENST00000508895 KAT6AQ92794 2004 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 CABYRO75952 493 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 ICAM3P32942 547 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 CLK2P49760 499 aaKnown RBP9.95□□□□□ -0.82
SNCA-211ENST00000508895 CPT1AP50416 773 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 FPGSQ05932 587 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 STK3Q13188 491 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 ANKRD1Q15327 319 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 ME3Q16798 604 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 MFSD5Q6N075 450 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 ZNF365Q70YC5 407 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 DHX37Q8IY37 1157 aaKnown RBP9.95□□□□□ -0.82
SNCA-211ENST00000508895 SAMD3Q8N6K7 520 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 SMARCC2Q8TAQ2 1214 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 RASGRP4Q8TDF6 673 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 EMID1Q96A84 441 aaPredicted RBP9.95□□□□□ -0.82
SNCA-211ENST00000508895 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 MAP3K20Q9NYL2 800 aaKnown RBP9.95□□□□□ -0.82
SNCA-211ENST00000508895 PKD2L1Q9P0L9 805 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 HDAC6Q9UBN7 1215 aa9.95□□□□□ -0.82
SNCA-211ENST00000508895 PRKAG2Q9UGJ0 569 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms