RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 C1orf131Q8NDD1 294 aaKnown RBP5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 SVIPQ8NHG7 77 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 SEC16BQ96JE7 1060 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 SPATA25Q9BR10 227 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 PRR13Q9NZ81 148 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 SUCOQ9UBS9 1254 aaKnown RBP5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 ANAPC4Q9UJX5 808 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 PLA2G2DQ9UNK4 145 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 ATP8A1Q9Y2Q0 1164 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 MRVI1Q9Y6F6 885 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 PMF1-BGLAPU3KQ54 211 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 CCDC85CA6NKD9 419 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 H0Y8X5 98 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 KCNQ2O43526 872 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 PLA2G1BP04054 148 aaKnown RBP5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 PTMAP06454 111 aaKnown RBP5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 FAM163BP0C2L3 166 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 TACR1P25103 407 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 PUM1Q14671 1186 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 BRD3Q15059 726 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 PPP2R5AQ15172 486 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 TTF1Q15361 905 aaPredicted RBP5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 TDRD10Q5VZ19 366 aaKnown RBP5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 ICE2Q659A1 982 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 INTS3Q68E01 1043 aaKnown RBP5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 C16orf86Q6ZW13 317 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 PDILTQ8N807 584 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 HNRNPLLQ8WVV9 542 aaKnown RBP5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 DDX1Q92499 740 aaKnown RBP5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 TRIM55Q9BYV6 548 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 ZNF700Q9H0M5 742 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 PDLIM7Q9NR12 457 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 TMEM260Q9NX78 707 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 INTUQ9ULD6 942 aa5.41□□□□□ -1.54
SMARCA5-202ENST00000508573 TBX3O15119 743 aa5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 TP53P04637 393 aaPredicted RBP5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 HSP90AA1P07900 732 aaKnown RBP5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 NCAM1P13591 858 aa5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 NASPP49321 788 aaPredicted RBP5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 EPHB1P54762 984 aa5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 RAPGEF1Q13905 1077 aa5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 VWA3BQ502W6 1294 aa5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 HHIPL2Q6UWX4 724 aa5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 LIPIQ6XZB0 460 aa5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 SLITRK4Q8IW52 837 aa5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 FEZ1Q99689 392 aa5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 FAM86C1Q9NVL1 165 aa5.4□□□□□ -1.54
SMARCA5-202ENST00000508573 SHTN1A0MZ66 631 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 MEIS3P2A8K0S8 358 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 K7ESM1 405 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 SHOXO15266 292 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 FGF10O15520 208 aaPredicted RBP5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 TBC1D8O95759 1140 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 SCGB1D2O95969 90 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 LDHCP07864 332 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 ACRP10323 421 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 ZNF445P59923 1031 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 POU5F1Q01860 360 aaKnown RBP5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 TMEM95Q3KNT9 176 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 ANKRD39Q53RE8 183 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 INO80DQ53TQ3 878 aaPredicted RBP5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 DALRD3Q5D0E6 543 aaKnown RBP5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 DCAF15Q66K64 600 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 DDX42Q86XP3 938 aaKnown RBP eCLIP5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 SECISBP2LQ93073 1101 aaKnown RBP5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 FCRL3Q96P31 734 aaPredicted RBP5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 NT5C1AQ9BXI3 368 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 PCGF6Q9BYE7 350 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 ZHX3Q9H4I2 956 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 PPCSQ9HAB8 311 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 RXFP1Q9HBX9 757 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 PALD1Q9ULE6 856 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 LZTS1Q9Y250 596 aa5.39□□□□□ -1.55
SMARCA5-202ENST00000508573 SRGAP3O43295 1099 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 ANP32CO43423 234 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 ATF3P18847 181 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 FBLN1P23142 703 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 MC3RP41968 323 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 PMS1P54277 932 aaKnown RBP5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 MCL1Q07820 350 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 AXDND1Q5T1B0 1012 aaPredicted RBP5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 CYP2R1Q6VVX0 501 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 SAPCD2Q86UD0 394 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 TTC8Q8TAM2 541 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 ALG3Q92685 438 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 RUNDC1Q96C34 613 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 PTCHD1Q96NR3 888 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 BCAS3Q9H6U6 928 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 GP6Q9HCN6 339 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 PTPRHQ9HD43 1115 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 MSRB2Q9Y3D2 182 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 RPGRIP1LQ68CZ1 1315 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 WASHC2CQ9Y4E1 1318 aa5.38□□□□□ -1.55
SMARCA5-202ENST00000508573 TIMM44O43615 452 aa5.37□□□□□ -1.55
SMARCA5-202ENST00000508573 ASGR2P07307 311 aa5.37□□□□□ -1.55
SMARCA5-202ENST00000508573 L1CAMP32004 1257 aa5.37□□□□□ -1.55
SMARCA5-202ENST00000508573 CNR2P34972 360 aa5.37□□□□□ -1.55
SMARCA5-202ENST00000508573 POU4F1Q01851 419 aa5.37□□□□□ -1.55
SMARCA5-202ENST00000508573 SIM2Q14190 667 aaPredicted RBP5.37□□□□□ -1.55
SMARCA5-202ENST00000508573 HLTFQ14527 1009 aaKnown RBP eCLIP5.37□□□□□ -1.551e-6■□□□□ 10.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms