RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 SCRN1Q12765 414 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 KIR3DS1Q14943 382 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 NR1I3Q14994 352 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 EEF1DP3Q658K8 133 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 RCSD1Q6JBY9 416 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 CNNM4Q6P4Q7 775 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 CYP2R1Q6VVX0 501 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 RPTNQ6XPR3 784 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 KRT26Q7Z3Y9 468 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 BRAPQ7Z569 592 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 ZDHHC14Q8IZN3 488 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 NAT16Q8N8M0 369 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 SYT8Q8NBV8 401 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 KCTD13Q8WZ19 329 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 TARS2Q9BW92 718 aaKnown RBP6.9□□□□□ -1.3
SPCS3-202ENST00000507001 TRIM39Q9HCM9 518 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 BACE2Q9Y5Z0 518 aa6.9□□□□□ -1.3
SPCS3-202ENST00000507001 GSG1L2A8MUP6 293 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 FGF10O15520 208 aaPredicted RBP6.89□□□□□ -1.31
SPCS3-202ENST00000507001 POU3F3P20264 500 aaPredicted RBP6.89□□□□□ -1.31
SPCS3-202ENST00000507001 HOXC12P31275 282 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 SEPHS1P49903 392 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 MAP4K2Q12851 820 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 PLEKHN1Q494U1 663 aaPredicted RBP6.89□□□□□ -1.31
SPCS3-202ENST00000507001 TRIM61Q5EBN2 209 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 ZFYVE27Q5T4F4 411 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 DENND5AQ6IQ26 1287 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 USP53Q70EK8 1073 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 FGD2Q7Z6J4 655 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 JAMLQ86YT9 394 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 NUP43Q8NFH3 380 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 CHAC2Q8WUX2 184 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 CCDC140Q96MF4 163 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 TMX1Q9H3N1 280 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 CYP26B1Q9NR63 512 aa6.89□□□□□ -1.31
SPCS3-202ENST00000507001 ASXL2Q76L83 1435 aa6.88□□□□□ -1.31
SPCS3-202ENST00000507001 C2orf71A6NGG8 1288 aa6.88□□□□□ -1.31
SPCS3-202ENST00000507001 NUDT19A8MXV4 375 aa6.88□□□□□ -1.31
SPCS3-202ENST00000507001 ZNF460Q14592 562 aa6.88□□□□□ -1.31
SPCS3-202ENST00000507001 SLC35F1Q5T1Q4 408 aa6.88□□□□□ -1.31
SPCS3-202ENST00000507001 ZC3H14Q6PJT7 736 aaKnown RBP6.88□□□□□ -1.31
SPCS3-202ENST00000507001 RNF180Q86T96 592 aa6.88□□□□□ -1.31
SPCS3-202ENST00000507001 LRRTM3Q86VH5 581 aa6.88□□□□□ -1.31
SPCS3-202ENST00000507001 PTCHD1Q96NR3 888 aa6.88□□□□□ -1.31
SPCS3-202ENST00000507001 ADAM7Q9H2U9 754 aa6.88□□□□□ -1.31
SPCS3-202ENST00000507001 TRAF6Q9Y4K3 522 aa6.88□□□□□ -1.31
SPCS3-202ENST00000507001 TRBV23OR9-2A0A075B6M9 112 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 FAM83GA6ND36 823 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 FFAR3O14843 346 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 SRGAP3O43295 1099 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 TBC1D8O95759 1140 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 SCG5P05408 212 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 THBDP07204 575 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 PFKLP17858 780 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 CDKN1CP49918 316 aaPredicted RBP6.87□□□□□ -1.31
SPCS3-202ENST00000507001 EVA1CP58658 441 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 GABREP78334 506 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 RBM10P98175 930 aaKnown RBP6.87□□□□□ -1.31
SPCS3-202ENST00000507001 HLA-DQA1Q5Y7H0 255 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 KCNT2Q6UVM3 1135 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 KREMEN2Q8NCW0 462 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 GSTCDQ8NEC7 633 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 STAG1Q8WVM7 1258 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 SCLYQ96I15 445 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 GPRC5CQ9NQ84 441 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 KLHL42Q9P2K6 505 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 IMPACTQ9P2X3 320 aa6.87□□□□□ -1.31
SPCS3-202ENST00000507001 MAGEC2Q9UBF1 373 aaPredicted RBP6.87□□□□□ -1.31
SPCS3-202ENST00000507001 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.86□□□□□ -1.31
SPCS3-202ENST00000507001 KCNQ2O43526 872 aa6.86□□□□□ -1.31
SPCS3-202ENST00000507001 RASGRP1O95267 797 aa6.86□□□□□ -1.31
SPCS3-202ENST00000507001 CPP00450 1065 aa6.86□□□□□ -1.31
SPCS3-202ENST00000507001 KCNC1P48547 511 aa6.86□□□□□ -1.31
SPCS3-202ENST00000507001 TARBP2Q15633 366 aaKnown RBP6.86□□□□□ -1.31
SPCS3-202ENST00000507001 ZXDCQ2QGD7 858 aaPredicted RBP6.86□□□□□ -1.31
SPCS3-202ENST00000507001 CT47A1Q5JQC4 288 aaPredicted RBP6.86□□□□□ -1.31
SPCS3-202ENST00000507001 PPIL6Q8IXY8 311 aa6.86□□□□□ -1.31
SPCS3-202ENST00000507001 COPS5Q92905 334 aa6.86□□□□□ -1.31
SPCS3-202ENST00000507001 JMJD8Q96S16 334 aa6.86□□□□□ -1.31
SPCS3-202ENST00000507001 CAAP1Q9H8G2 361 aa6.86□□□□□ -1.31
SPCS3-202ENST00000507001 DDX56Q9NY93 547 aaKnown RBP6.86□□□□□ -1.31
SPCS3-202ENST00000507001 TNPO3Q9Y5L0 923 aaKnown RBP6.86□□□□□ -1.31
SPCS3-202ENST00000507001 FBLN1P23142 703 aa6.85□□□□□ -1.31
SPCS3-202ENST00000507001 SOX5P35711 763 aa6.85□□□□□ -1.31
SPCS3-202ENST00000507001 SLURP1P55000 103 aa6.85□□□□□ -1.31
SPCS3-202ENST00000507001 PLP2Q04941 152 aa6.85□□□□□ -1.31
SPCS3-202ENST00000507001 VWA3BQ502W6 1294 aa6.85□□□□□ -1.31
SPCS3-202ENST00000507001 PRPF38AQ8NAV1 312 aaKnown RBP6.85□□□□□ -1.31
SPCS3-202ENST00000507001 TMEM52Q8NDY8 209 aa6.85□□□□□ -1.31
SPCS3-202ENST00000507001 NPLOC4Q8TAT6 608 aa6.85□□□□□ -1.31
SPCS3-202ENST00000507001 FRS2Q8WU20 508 aa6.85□□□□□ -1.31
SPCS3-202ENST00000507001 PTPRN2Q92932 1015 aa6.85□□□□□ -1.31
SPCS3-202ENST00000507001 BDH2Q9BUT1 245 aa6.85□□□□□ -1.31
SPCS3-202ENST00000507001 INTS7Q9NVH2 962 aaKnown RBP6.85□□□□□ -1.31
SPCS3-202ENST00000507001 TMEFF2Q9UIK5 374 aaPredicted RBP6.85□□□□□ -1.31
SPCS3-202ENST00000507001 ATP8A1Q9Y2Q0 1164 aa6.85□□□□□ -1.31
SPCS3-202ENST00000507001 ARNTLO00327 626 aa6.84□□□□□ -1.31
SPCS3-202ENST00000507001 OPA1O60313 960 aa6.84□□□□□ -1.31
SPCS3-202ENST00000507001 EFCAB14O75071 495 aa6.84□□□□□ -1.31
SPCS3-202ENST00000507001 CYBBP04839 570 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms