RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 COL20A1Q9P218 1284 aa12.82□□□□□ -0.36
ITGA3-208ENST00000506437 CCNT1O60563 726 aaKnown RBP12.82□□□□□ -0.36
ITGA3-208ENST00000506437 NT5C2P49902 561 aa12.82□□□□□ -0.36
ITGA3-208ENST00000506437 PPIL2Q13356 520 aa12.82□□□□□ -0.36
ITGA3-208ENST00000506437 UBXN6Q9BZV1 441 aa12.82□□□□□ -0.36
ITGA3-208ENST00000506437 RTEL1Q9NZ71 1219 aa12.82□□□□□ -0.36
ITGA3-208ENST00000506437 VPS18Q9P253 973 aa12.82□□□□□ -0.36
ITGA3-208ENST00000506437 PDHXO00330 501 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 CAND2O75155 1236 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 DSG3P32926 999 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 LIG3P49916 1009 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 ZNF75DP51815 510 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 SPRYD7Q5W111 196 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 GPAT2Q6NUI2 795 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 USP49Q70CQ1 688 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 TRMT1LQ7Z2T5 733 aaKnown RBP12.81□□□□□ -0.36
ITGA3-208ENST00000506437 NCAPG2Q86XI2 1143 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 SNAPC2Q13487 334 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 ANO1Q5XXA6 986 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 JMYQ8N9B5 988 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 CCDC148Q8NFR7 591 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 CUL5Q93034 780 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 PLIN2Q99541 437 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 TMEM60Q9H2L4 133 aa12.81□□□□□ -0.36
ITGA3-208ENST00000506437 FOXP1Q9H334 677 aaPredicted RBP12.81□□□□□ -0.36
ITGA3-208ENST00000506437 ZNF214Q9UL59 606 aaPredicted RBP12.81□□□□□ -0.36
ITGA3-208ENST00000506437 PAPPA2Q9BXP8 1791 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 A0A087WWV3 80 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 A0A1B0GVL5 298 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 EDIL3O43854 480 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 HERVK_113P62684 666 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 FAM160B2Q86V87 743 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 ATP6V1DQ9Y5K8 247 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 DOCK3Q8IZD9 2030 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 M0R2N6 131 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 IGF2BP3O00425 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
ITGA3-208ENST00000506437 ZBED4O75132 1171 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 TOMM70O94826 608 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 SMC2O95347 1197 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 PGK2P07205 417 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 LIG1P18858 919 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 FSTL1Q12841 308 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 KCNV1Q6PIU1 500 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 LRRC8AQ8IWT6 810 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 PDILTQ8N807 584 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 RBM46Q8TBY0 533 aaKnown RBP12.8□□□□□ -0.36
ITGA3-208ENST00000506437 BICD2Q8TD16 824 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 UBXN4Q92575 508 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 RNF146Q9NTX7 359 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 PCDHA7Q9UN72 937 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 PP2D1A8MPX8 630 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 SLC37A4O43826 429 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 EIF2AK2P19525 551 aaKnown RBP12.8□□□□□ -0.36
ITGA3-208ENST00000506437 GNA11P29992 359 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 PTGDRQ13258 359 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 TTC38Q5R3I4 469 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 KIRREL3Q8IZU9 778 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 SMC1BQ8NDV3 1235 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 IL31RAQ8NI17 732 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 FAM200AQ8TCP9 573 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 EXOC4Q96A65 974 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 PORCNQ9H237 461 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 CBX8Q9HC52 389 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 CPA4Q9UI42 421 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 PASKQ96RG2 1323 aa12.8□□□□□ -0.36
ITGA3-208ENST00000506437 FRMD3A2A2Y4 597 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 N4BP1O75113 896 aaKnown RBP12.79□□□□□ -0.36
ITGA3-208ENST00000506437 ICAM1P05362 532 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 RPS6P62753 249 aaKnown RBP12.79□□□□□ -0.36
ITGA3-208ENST00000506437 CNTN2Q02246 1040 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 BAATQ14032 418 aaPredicted RBP12.79□□□□□ -0.36
ITGA3-208ENST00000506437 EEPD1Q7L9B9 569 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 TADA2BQ86TJ2 420 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 RASAL3Q86YV0 1011 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 LINC00301Q8NCQ3 95 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 RIC8AQ9NPQ8 531 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 KCNH4Q9UQ05 1017 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 RLFQ13129 1914 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 VWA3AA6NCI4 1184 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 GOLGA6L4A6NEF3 574 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 PHACTR2O75167 634 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 HNRNPH1P31943 449 aaKnown RBP12.79□□□□□ -0.36
ITGA3-208ENST00000506437 STAT3P40763 770 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 ANO6Q4KMQ2 910 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 RGMBQ6NW40 437 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 BRAPQ7Z569 592 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 CLEC4DQ8WXI8 215 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 RBPJLQ9UBG7 517 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 AGTPBP1Q9UPW5 1226 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 MYH7BA7E2Y1 1941 aa12.79□□□□□ -0.36
ITGA3-208ENST00000506437 SPTLC2O15270 562 aa12.78□□□□□ -0.36
ITGA3-208ENST00000506437 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
ITGA3-208ENST00000506437 ZC3H12AQ5D1E8 599 aaKnown RBP12.78□□□□□ -0.36
ITGA3-208ENST00000506437 SH3D19Q5HYK7 790 aa12.78□□□□□ -0.36
ITGA3-208ENST00000506437 IQUBQ8NA54 791 aa12.78□□□□□ -0.36
ITGA3-208ENST00000506437 TAAR1Q96RJ0 339 aa12.78□□□□□ -0.36
ITGA3-208ENST00000506437 GOLPH3LQ9H4A5 285 aa12.78□□□□□ -0.36
ITGA3-208ENST00000506437 ARGLU1Q9NWB6 273 aaPredicted RBP12.78□□□□□ -0.36
ITGA3-208ENST00000506437 IRAK4Q9NWZ3 460 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms