RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 FIGNQ5HY92 759 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 KIAA1755Q5JYT7 1200 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 FKBP15Q5T1M5 1219 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 PPP4R3CPQ6ZMV5 832 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 KRT26Q7Z3Y9 468 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 MYOCDQ8IZQ8 938 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 PRPF38AQ8NAV1 312 aaKnown RBP19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 CNOT6LQ96LI5 555 aaKnown RBP19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 TEPSINQ96N21 525 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 PANK4Q9NVE7 773 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 DNM3Q9UQ16 869 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 FRMD3A2A2Y4 597 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 IDEP14735 1019 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 COASYQ13057 564 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 TSR1Q2NL82 804 aaKnown RBP19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 FAM26FQ5R3K3 315 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 CYP26C1Q6V0L0 522 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 MIGA2Q7L4E1 593 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 REXO1L1PQ8IX06 675 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 TUFT1Q9NNX1 390 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 SLC39A2Q9NP94 309 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 FAM86B1E9PN63 330 aa19.22■□□□□ 0.67
TRAPPC11-204ENST00000505676 MSH4O15457 936 aa19.22■□□□□ 0.67
TRAPPC11-204ENST00000505676 GNA14O95837 355 aa19.22■□□□□ 0.67
TRAPPC11-204ENST00000505676 FAM86B2P0C5J1 330 aa19.22■□□□□ 0.67
TRAPPC11-204ENST00000505676 CASP14P31944 242 aa19.22■□□□□ 0.67
TRAPPC11-204ENST00000505676 SNAP25P60880 206 aa19.22■□□□□ 0.67
TRAPPC11-204ENST00000505676 DYMQ7RTS9 669 aa19.22■□□□□ 0.67
TRAPPC11-204ENST00000505676 KCNK18Q7Z418 384 aa19.22■□□□□ 0.67
TRAPPC11-204ENST00000505676 P2RX7Q99572 595 aaKnown RBP19.22■□□□□ 0.67
TRAPPC11-204ENST00000505676 WDR11Q9BZH6 1224 aa19.22■□□□□ 0.67
TRAPPC11-204ENST00000505676 ABHD10Q9NUJ1 306 aa19.22■□□□□ 0.67
TRAPPC11-204ENST00000505676 MTIF2P46199 727 aaKnown RBP19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 ECM1Q16610 540 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 ARHGAP27Q6ZUM4 889 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 LDHDQ86WU2 507 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 SYT2Q8N9I0 419 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 ZNF592Q92610 1267 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 CEP63Q96MT8 703 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 ERGIC2Q96RQ1 377 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 SLF1Q9BQI6 1058 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 ZNF341Q9BYN7 854 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 ATAD5Q96QE3 1844 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 IGLV3-22A0A075B6J6 115 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 CFBP00751 764 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 SLC12A3P55017 1021 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 PPP2R5CQ13362 524 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 KIF4BQ2VIQ3 1234 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 NIPA1Q7RTP0 329 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 GPBP1Q86WP2 473 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 APOBEC3FQ8IUX4 373 aaKnown RBP19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 MAF1Q9H063 256 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 SEMA6BQ9H3T3 888 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 VAV3Q9UKW4 847 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 CAPN11Q9UMQ6 739 aa19.21■□□□□ 0.67
TRAPPC11-204ENST00000505676 A0A1W2PQJ5 194 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 POTEB3A0JP26 581 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 POTECB2RU33 542 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 PRKCSHP14314 528 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 CYP11B2P19099 503 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 HSD17B4P51659 736 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 NCAPH2Q6IBW4 605 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 POTEBQ6S5H4 581 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 MICALL2Q8IY33 904 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 NEK9Q8TD19 979 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 SGIP1Q9BQI5 828 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 L2HGDHQ9H9P8 463 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 AS3MTQ9HBK9 375 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 LUC7L2Q9Y383 392 aaKnown RBP19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 PPP2R3BQ9Y5P8 575 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 MED24O75448 989 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 HOXA13P31271 388 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 GMPSP49915 693 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 FKBP3Q00688 224 aaKnown RBP19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 MAN2A1Q16706 1144 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 CCDC174Q6PII3 467 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 CCDC84Q86UT8 332 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 CATSPER3Q86XQ3 398 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 OR8K1Q8NGG5 319 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 SLC5A5Q92911 643 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 NOC4LQ9BVI4 516 aaKnown RBP19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 BCS1LQ9Y276 419 aa19.2■□□□□ 0.66
TRAPPC11-204ENST00000505676 BCRP11274 1271 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 FXR1P51114 621 aaKnown RBP eCLIP19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 CEP55Q53EZ4 464 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 CREBRFQ8IUR6 639 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 DNAJC7Q99615 494 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 EYA4O95677 639 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 KRT18P05783 430 aaKnown RBP19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 KRT9P35527 623 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 GOLGA8FQ08AF8 430 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 GOLGA8DPQ0D2H9 430 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 TBC1D8BQ0IIM8 1120 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 ZNF397Q8NF99 534 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 WDR18Q9BV38 432 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 KCND2Q9NZV8 630 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 CNOT7Q9UIV1 285 aaKnown RBP19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 CCPG1Q9ULG6 757 aa19.19■□□□□ 0.66
TRAPPC11-204ENST00000505676 E9PMD0 336 aa19.18■□□□□ 0.66
TRAPPC11-204ENST00000505676 COBLO75128 1261 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms