RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 ZNF213O14771 459 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 ATMINO43313 823 aaPredicted RBP6.84□□□□□ -1.31
GYPB-205ENST00000505583 RGS20O76081 388 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 GH1P01241 217 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 ZNF286BP0CG31 522 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 PCP11498 1178 aaKnown RBP6.84□□□□□ -1.31
GYPB-205ENST00000505583 CKBP12277 381 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 ACTN1P12814 892 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 EIF2AK2P19525 551 aaKnown RBP6.84□□□□□ -1.31
GYPB-205ENST00000505583 RFC2P35250 354 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 BFSP2Q13515 415 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 SKIV2LQ15477 1246 aaKnown RBP6.84□□□□□ -1.31
GYPB-205ENST00000505583 GPATCH4Q5T3I0 446 aaKnown RBP6.84□□□□□ -1.31
GYPB-205ENST00000505583 LRRC8DQ7L1W4 858 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 SESTD1Q86VW0 696 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 IL31RAQ8NI17 732 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 PHOSPHO2Q8TCD6 241 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 NSUN6Q8TEA1 469 aaKnown RBP6.84□□□□□ -1.31
GYPB-205ENST00000505583 GPKOWQ92917 476 aaPredicted RBP eCLIP6.84□□□□□ -1.31
GYPB-205ENST00000505583 KHSRPQ92945 711 aaKnown RBP eCLIP6.84□□□□□ -1.313e-6■■■□□ 17.7
GYPB-205ENST00000505583 ZSCAN10Q96SZ4 725 aaPredicted RBP6.84□□□□□ -1.31
GYPB-205ENST00000505583 ALG1Q9BT22 464 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 RNF41Q9H4P4 317 aaPredicted RBP6.84□□□□□ -1.31
GYPB-205ENST00000505583 BCAS3Q9H6U6 928 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 PXMP2Q9NR77 195 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 HDAC6Q9UBN7 1215 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 GTF2IRD1Q9UHL9 959 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 MTUS1Q9ULD2 1270 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 NOD1Q9Y239 953 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 TELO2Q9Y4R8 837 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 ATG2AQ2TAZ0 1938 aa6.84□□□□□ -1.32
GYPB-205ENST00000505583 MICAL3Q7RTP6 2002 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 HAS3O00219 553 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 TLL1O43897 1013 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 CFBP00751 764 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 CXCL10P02778 98 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 NR3C2P08235 984 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 PARP1P09874 1014 aaKnown RBP6.83□□□□□ -1.32
GYPB-205ENST00000505583 SELPP16109 830 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 CASTP20810 708 aaKnown RBP6.83□□□□□ -1.32
GYPB-205ENST00000505583 HOXA13P31271 388 aaPredicted RBP6.83□□□□□ -1.32
GYPB-205ENST00000505583 PSEN2P49810 448 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 HSD17B4P51659 736 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 SP2Q02086 613 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 NUCB1Q02818 461 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 SEC23AQ15436 765 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 STXBP2Q15833 593 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 KIAA0753Q2KHM9 967 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 TRIM71Q2Q1W2 868 aaKnown RBP6.83□□□□□ -1.32
GYPB-205ENST00000505583 ASPRV1Q53RT3 343 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 BRDTQ58F21 947 aaPredicted RBP6.83□□□□□ -1.32
GYPB-205ENST00000505583 ZNF618Q5T7W0 954 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 FAM117BQ6P1L5 589 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.83□□□□□ -1.32
GYPB-205ENST00000505583 CYB5R4Q7L1T6 521 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 CHD1LQ86WJ1 897 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 FBXO11Q86XK2 927 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 TICAM2Q86XR7 235 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 AFAP1L1Q8TED9 768 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 GDPD5Q8WTR4 605 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 IWS1Q96ST2 819 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 MPHOSPH6Q99547 160 aaKnown RBP6.83□□□□□ -1.32
GYPB-205ENST00000505583 OSBPL3Q9H4L5 887 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 EPHX3Q9H6B9 360 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 KAT14Q9H8E8 782 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 SUGCTQ9HAC7 445 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 SENP2Q9HC62 589 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 CD320Q9NPF0 282 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 DAXXQ9UER7 740 aaPredicted RBP6.83□□□□□ -1.32
GYPB-205ENST00000505583 PNMA2Q9UL42 364 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 TAF6LQ9Y6J9 622 aa6.83□□□□□ -1.32
GYPB-205ENST00000505583 BAZ2BQ9UIF8 2168 aaKnown RBP6.82□□□□□ -1.32
GYPB-205ENST00000505583 NLRC5Q86WI3 1866 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 LINC01553A4QN01 128 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 B4DLN1 442 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 DHX16O60231 1041 aaKnown RBP6.82□□□□□ -1.32
GYPB-205ENST00000505583 EIF3JO75822 258 aaKnown RBP6.82□□□□□ -1.32
GYPB-205ENST00000505583 BAIAP3O94812 1187 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 GJB5O95377 273 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 F2P00734 622 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 MYCLP12524 364 aaPredicted RBP6.82□□□□□ -1.32
GYPB-205ENST00000505583 HOXD8P13378 290 aaPredicted RBP6.82□□□□□ -1.32
GYPB-205ENST00000505583 MRPL12P52815 198 aaKnown RBP6.82□□□□□ -1.32
GYPB-205ENST00000505583 GHRHRQ02643 423 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 RBL2Q08999 1139 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 MFSD10Q14728 455 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 DGKDQ16760 1214 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 HSDL1Q3SXM5 330 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 ARHGEF16Q5VV41 709 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 MYSM1Q5VVJ2 828 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 CNKSR3Q6P9H4 555 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 IQCA1Q86XH1 822 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 MCF2L2Q86YR7 1114 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 C7orf31Q8N865 590 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 IL27Q8NEV9 243 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 PPTC7Q8NI37 304 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 CAGE1Q8TC20 777 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 EMID1Q96A84 441 aaPredicted RBP6.82□□□□□ -1.32
GYPB-205ENST00000505583 MTMR8Q96EF0 704 aa6.82□□□□□ -1.32
GYPB-205ENST00000505583 PDCD2LQ9BRP1 358 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms