RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 UPK3BL1B0FP48 263 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 UPK3BL2E5RIL1 263 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 CCP110O43303 1012 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 EOMESO95936 686 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 ZBED1O96006 694 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 ALAS1P13196 640 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 BPIP17213 487 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 TFE3P19532 575 aaPredicted RBP8.06□□□□□ -1.12
CDH9-202ENST00000505020 ADH7P40394 386 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 CLCQ05315 142 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 LLGL1Q15334 1064 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 C5orf22Q49AR2 442 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 SH3PXD2AQ5TCZ1 1133 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 KAZNQ674X7 775 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 OR2C3Q8N628 320 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 ANKRD52Q8NB46 1076 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 FAM156AQ8NDB6 213 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 ANKRD24Q8TF21 1146 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 ERCC4Q92889 916 aaPredicted RBP8.06□□□□□ -1.12
CDH9-202ENST00000505020 NUP88Q99567 741 aaPredicted RBP8.06□□□□□ -1.12
CDH9-202ENST00000505020 TREX2Q9BQ50 279 aaPredicted RBP8.06□□□□□ -1.12
CDH9-202ENST00000505020 SLF1Q9BQI6 1058 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 APOL5Q9BWW9 433 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 CCDC68Q9H2F9 335 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 OSBPL3Q9H4L5 887 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 ZHX1Q9UKY1 873 aaPredicted RBP8.06□□□□□ -1.12
CDH9-202ENST00000505020 ANGPTL3Q9Y5C1 460 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 A6NLC8 198 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 XPOTO43592 962 aaKnown RBP8.05□□□□□ -1.12
CDH9-202ENST00000505020 AP1G1O43747 822 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 ZBED4O75132 1171 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 DGKIO75912 1065 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 F13A1P00488 732 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 POLBP06746 335 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 NUDT7P0C024 238 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 CNTFP26441 200 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 HNF4AP41235 474 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 CTCFP49711 727 aaPredicted RBP8.05□□□□□ -1.12
CDH9-202ENST00000505020 ZNF165P49910 485 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 YARSP54577 528 aaKnown RBP8.05□□□□□ -1.12
CDH9-202ENST00000505020 DRG2P55039 364 aaKnown RBP8.05□□□□□ -1.12
CDH9-202ENST00000505020 SLC7A5Q01650 507 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 IFIT1BQ5T764 474 aaKnown RBP8.05□□□□□ -1.12
CDH9-202ENST00000505020 ALKBH5Q6P6C2 394 aaKnown RBP8.05□□□□□ -1.12
CDH9-202ENST00000505020 LRRC69Q6ZNQ3 347 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 SRGAP1Q7Z6B7 1085 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 CCDC116Q8IYX3 515 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 DRAXINQ8NBI3 349 aaPredicted RBP8.05□□□□□ -1.12
CDH9-202ENST00000505020 IPMKQ8NFU5 416 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 L3MBTL2Q969R5 705 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 KIAA1191Q96A73 305 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 CLMNQ96JQ2 1002 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 SPATA17Q96L03 361 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 CDC6Q99741 560 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 SLC39A3Q9BRY0 314 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 STK31Q9BXU1 1019 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 TEX13BQ9BXU2 312 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 DKK3Q9UBP4 350 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 AASSQ9UDR5 926 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 COG5Q9UP83 839 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 KCNH4Q9UQ05 1017 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 APOBEC2Q9Y235 224 aaKnown RBP8.05□□□□□ -1.12
CDH9-202ENST00000505020 POLHQ9Y253 713 aa8.05□□□□□ -1.12
CDH9-202ENST00000505020 SART1O43290 800 aaKnown RBP8.04□□□□□ -1.12
CDH9-202ENST00000505020 ST18O60284 1047 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 GOSR1O95249 250 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 DHRS4L1P0CG22 281 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 ZNF853P0CG23 659 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 PLCG2P16885 1265 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 ATP4AP20648 1035 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 TMOD1P28289 359 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 FCGRTP55899 365 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 IL1RL1Q01638 556 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 MLLT1Q03111 559 aaPredicted RBP8.04□□□□□ -1.12
CDH9-202ENST00000505020 KRTCAP3Q53RY4 240 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 DZIP1Q86YF9 867 aaKnown RBP8.04□□□□□ -1.12
CDH9-202ENST00000505020 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.04□□□□□ -1.12
CDH9-202ENST00000505020 GLIS3Q8NEA6 775 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 SNX29Q8TEQ0 813 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 MRPL4Q9BYD3 311 aaKnown RBP8.04□□□□□ -1.12
CDH9-202ENST00000505020 TXLNGYQ9BZA5 131 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 ETNK1Q9HBU6 452 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 ZNF304Q9HCX3 659 aa8.04□□□□□ -1.12
CDH9-202ENST00000505020 OLA1Q9NTK5 396 aaKnown RBP8.04□□□□□ -1.12
CDH9-202ENST00000505020 A0A087WV62 115 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 CCDC66A2RUB6 948 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 M0QX08 132 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 M0R2C6 588 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 NDC80O14777 642 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 SGSM2O43147 1006 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 ZEB2O60315 1214 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 MTRF1O75570 445 aaKnown RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 SNX4O95219 450 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 CELA3AP09093 270 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 VCAM1P19320 739 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 HOXA10P31260 410 aaPredicted RBP8.03□□□□□ -1.12
CDH9-202ENST00000505020 HSPA1LP34931 641 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 LIFRP42702 1097 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 TUBP50607 506 aa8.03□□□□□ -1.12
CDH9-202ENST00000505020 CLCN2P51788 898 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms