RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 SUGT1Q9Y2Z0 365 aa10.79□□□□□ -0.68
CSF1R-203ENST00000504875 ESYT2A0FGR8 921 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 TBCAO75347 108 aaKnown RBP10.78□□□□□ -0.68
CSF1R-203ENST00000504875 CCDC93Q567U6 631 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 HHIPL2Q6UWX4 724 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 NDST4Q9H3R1 872 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 NHEJ1Q9H9Q4 299 aaPredicted RBP10.78□□□□□ -0.68
CSF1R-203ENST00000504875 MYO6Q9UM54 1294 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 CLSTN1O94985 981 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 PLA2G4BP0C869 781 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 FAM193AP78312 1265 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 TTC31Q49AM3 519 aaPredicted RBP10.78□□□□□ -0.68
CSF1R-203ENST00000504875 HSP90B2PQ58FF3 399 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 DCAF17Q5H9S7 520 aaPredicted RBP10.78□□□□□ -0.68
CSF1R-203ENST00000504875 IRF2BP1Q8IU81 584 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 DUSP9Q99956 384 aaKnown RBP10.78□□□□□ -0.68
CSF1R-203ENST00000504875 TCEAL9Q9UHQ7 104 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 POTEFA5A3E0 1075 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 POTEIP0CG38 1075 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 SMARCA1P28370 1054 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 RAPGEF1Q13905 1077 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 HAUS3Q68CZ6 603 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 POTEGQ6S5H5 508 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 POTEEQ6S8J3 1075 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 KRT26Q7Z3Y9 468 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 KCNK18Q7Z418 384 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 LARGE2Q8N3Y3 721 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 KIAA0895Q8NCT3 520 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 EHBP1Q8NDI1 1231 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 LRRC15Q8TF66 581 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 MMTAG2Q9BU76 263 aaKnown RBP10.78□□□□□ -0.68
CSF1R-203ENST00000504875 HAUS4Q9H6D7 363 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 HDAC6Q9UBN7 1215 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 LCMT1Q9UIC8 334 aa10.78□□□□□ -0.68
CSF1R-203ENST00000504875 SCN7AQ01118 1682 aa10.77□□□□□ -0.68
CSF1R-203ENST00000504875 LAMB2P55268 1798 aa10.77□□□□□ -0.68
CSF1R-203ENST00000504875 COL5A3P25940 1745 aaPredicted RBP10.77□□□□□ -0.68
CSF1R-203ENST00000504875 SRGAP2O75044 1071 aa10.77□□□□□ -0.68
CSF1R-203ENST00000504875 PNMA6AP0CW24 399 aaPredicted RBP10.77□□□□□ -0.68
CSF1R-203ENST00000504875 BMP3P12645 472 aa10.77□□□□□ -0.68
CSF1R-203ENST00000504875 PBX1P40424 430 aa10.77□□□□□ -0.68
CSF1R-203ENST00000504875 ZBED6P86452 979 aa10.77□□□□□ -0.68
CSF1R-203ENST00000504875 FLAD1Q8NFF5 587 aa10.77□□□□□ -0.68
CSF1R-203ENST00000504875 RABGGTAQ92696 567 aa10.77□□□□□ -0.68
CSF1R-203ENST00000504875 PNMA5Q96PV4 448 aa10.77□□□□□ -0.68
CSF1R-203ENST00000504875 IFIH1Q9BYX4 1025 aaKnown RBP10.77□□□□□ -0.68
CSF1R-203ENST00000504875 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.77□□□□□ -0.68
CSF1R-203ENST00000504875 DNM3Q9UQ16 869 aa10.77□□□□□ -0.68
CSF1R-203ENST00000504875 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.77□□□□□ -0.68
CSF1R-203ENST00000504875 CASZ1Q86V15 1759 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 KDM3AQ9Y4C1 1321 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 TNRC6CQ9HCJ0 1690 aaKnown RBP10.77□□□□□ -0.69
CSF1R-203ENST00000504875 GCFC2P16383 781 aaKnown RBP10.77□□□□□ -0.69
CSF1R-203ENST00000504875 COASYQ13057 564 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 MAN2A1Q16706 1144 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 VWA3BQ502W6 1294 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 MIGA2Q7L4E1 593 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 PROM2Q8N271 834 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 GLIS3Q8NEA6 775 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 GLT8D2Q9H1C3 349 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 SEMA6BQ9H3T3 888 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 BLOC1S4Q9NUP1 217 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 CAPN11Q9UMQ6 739 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 LRRC10BA6NIK2 292 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 DDX39AO00148 427 aaKnown RBP10.77□□□□□ -0.69
CSF1R-203ENST00000504875 FANCGO15287 622 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 TACC1O75410 805 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 ARHGAP4P98171 946 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 GABPAQ06546 454 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 PLS1Q14651 629 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 DLGAP5Q15398 846 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 SYDE2Q5VT97 1194 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 TMEM179Q6ZVK1 233 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 CCDC84Q86UT8 332 aaPredicted RBP10.77□□□□□ -0.69
CSF1R-203ENST00000504875 CCDC155Q8N6L0 562 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 CNKSR1Q969H4 720 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 GDAP1L1Q96MZ0 367 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 SPAG5Q96R06 1193 aa10.77□□□□□ -0.69
CSF1R-203ENST00000504875 NAP1L4Q99733 375 aaKnown RBP10.77□□□□□ -0.69
CSF1R-203ENST00000504875 SCAF8Q9UPN6 1271 aaKnown RBP10.77□□□□□ -0.69
CSF1R-203ENST00000504875 A0A1W2PQC6 194 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 PPP1R11O60927 126 aaPredicted RBP10.76□□□□□ -0.69
CSF1R-203ENST00000504875 NDUFB10O96000 172 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 MAGEA1P43355 309 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 FXR2P51116 673 aaKnown RBP eCLIP10.76□□□□□ -0.69
CSF1R-203ENST00000504875 LSM14BQ9BX40 385 aaKnown RBP10.76□□□□□ -0.69
CSF1R-203ENST00000504875 ARHGEF10LQ9HCE6 1279 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 HDAC9Q9UKV0 1011 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 JRKLQ9Y4A0 524 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 SAR1BQ9Y6B6 198 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 PVALEFA0A1B0GWK0 134 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 PHACTR2O75167 634 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 POLR2FP61218 127 aaKnown RBP10.76□□□□□ -0.69
CSF1R-203ENST00000504875 STRIP1Q5VSL9 837 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 CC2D2BQ6DHV5 1058 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 TPH2Q8IWU9 490 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 ALS2CR12Q96Q35 445 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 POTEB2H3BUK9 544 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 CETN3O15182 167 aa10.76□□□□□ -0.69
CSF1R-203ENST00000504875 PLEKP08567 350 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms