RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 COL20A1Q9P218 1284 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 GRXCR2A6NFK2 248 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 UPP2O95045 317 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 CTSHP09668 335 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 MX1P20591 662 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 THPOP40225 353 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 PTK7Q13308 1070 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 GPM6BQ13491 265 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 MBTPS1Q14703 1052 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 CLUL1Q15846 466 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 TRIM71Q2Q1W2 868 aaKnown RBP8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 EPC2Q52LR7 807 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 ARHGEF16Q5VV41 709 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 TRAF7Q6Q0C0 670 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 BANK1Q8NDB2 785 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 NSUN6Q8TEA1 469 aaKnown RBP8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 ANKS1AQ92625 1134 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 FBXL18Q96ME1 805 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 RMDN3Q96TC7 470 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 ZKSCAN3Q9BRR0 538 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 CLDND1Q9NY35 253 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 ANAPC4Q9UJX5 808 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 INSL6Q9Y581 213 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 MRVI1Q9Y6F6 885 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 BDP1A6H8Y1 2624 aa8.07□□□□□ -1.12
NPIPB3-203ENST00000504841 RSPH10B2B2RC85 870 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 F2P00734 622 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 RSPH10BP0C881 870 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 MYCLP12524 364 aaPredicted RBP8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 HIC1Q14526 733 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 STXBP2Q15833 593 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 PUS10Q3MIT2 529 aaKnown RBP8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 RPAINQ86UA6 219 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 FBXO11Q86XK2 927 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 TBC1D10CQ8IV04 446 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 PPTC7Q8NI37 304 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 NEK9Q8TD19 979 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 ZFP91Q96JP5 570 aaPredicted RBP8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 FAM227BQ96M60 508 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 SPATA33Q96N06 139 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 DCBLD2Q96PD2 775 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 VAT1LQ9HCJ6 419 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 CTNNA3Q9UI47 895 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 DDX41Q9UJV9 622 aaKnown RBP8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 FAM50BQ9Y247 325 aa8.06□□□□□ -1.12
NPIPB3-203ENST00000504841 ABCB11O95342 1321 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 EMSYQ7Z589 1322 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 MICAL3Q7RTP6 2002 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 A0A0D9SFI3 127 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 HAS3O00219 553 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 CFBP00751 764 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 FGAP02671 866 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 FGRP09769 529 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 SNHG28P0DPA3 235 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 CTNNB1P35222 781 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 HTRA4P83105 476 aaPredicted RBP8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 ZP2Q05996 745 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 LAMC2Q13753 1193 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 QRICH1Q2TAL8 776 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 GPATCH4Q5T3I0 446 aaKnown RBP8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 MFSD6Q6ZSS7 791 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 HFE2Q6ZVN8 426 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 MCF2L2Q86YR7 1114 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 TMEM192Q8IY95 271 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 ADGRF4Q8IZF3 695 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 SEPT8Q92599 483 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 PABPC5Q96DU9 382 aaKnown RBP8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 SAMD11Q96NU1 681 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 IWS1Q96ST2 819 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 IFIH1Q9BYX4 1025 aaKnown RBP8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 NSUN3Q9H649 340 aaKnown RBP8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 PXMP2Q9NR77 195 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 TCP11L1Q9NUJ3 509 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 MUTYHQ9UIF7 546 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 KIAA1217Q5T5P2 1943 aa8.05□□□□□ -1.12
NPIPB3-203ENST00000504841 NEDD4P46934 1319 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 C17orf102A2RUQ5 167 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 H3BNC9 293 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 EIF3JO75822 258 aaKnown RBP8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 GGPS1O95749 300 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 NR3C2P08235 984 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 HSPD1P10809 573 aaKnown RBP8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 IRS1P35568 1242 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 ALX1Q15699 326 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 HSDL1Q3SXM5 330 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 PLEKHG4Q58EX7 1191 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 ZNF589Q86UQ0 364 aaPredicted RBP8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 SERINC5Q86VE9 423 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 ADHFE1Q8IWW8 467 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 PNMA1Q8ND90 353 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 RGS22Q8NE09 1264 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 ESR2Q92731 530 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 ATP6V0A1Q93050 837 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 EMID1Q96A84 441 aaPredicted RBP8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 EVI5LQ96CN4 794 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 TTC14Q96N46 770 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 OSBPL7Q9BZF2 842 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 UPF3BQ9BZI7 483 aaKnown RBP8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 KAT14Q9H8E8 782 aa8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 HELLSQ9NRZ9 838 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms