RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 SPATA20Q8TB22 786 aa13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 SMCR8Q8TEV9 937 aaPredicted RBP13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 GSDMAQ96QA5 445 aa13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 IWS1Q96ST2 819 aa13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 PARK7Q99497 189 aaKnown RBP13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 MPHOSPH6Q99547 160 aaKnown RBP13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 RIT2Q99578 217 aa13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 ZNF577Q9BSK1 485 aa13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 PAGR1Q9BTK6 254 aa13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 MMTAG2Q9BU76 263 aaKnown RBP13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 GTPBP4Q9BZE4 634 aaKnown RBP13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 MROH8Q9H579 483 aa13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 GPBP1L1Q9HC44 474 aaPredicted RBP13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 JADE2Q9NQC1 790 aa13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 RMND1Q9NWS8 449 aa13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 VAV3Q9UKW4 847 aa13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 PCDHA5Q9Y5H7 936 aa13.42□□□□□ -0.26
POLR2J3-210ENST00000504677 LCTP09848 1927 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 B4DLN1 442 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 PDHXO00330 501 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 MAFGO15525 162 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 GAS7O60861 476 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 EIF2AK2P19525 551 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 MUTP22033 750 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 CCT6AP40227 531 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 SARSP49591 514 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 ZNF165P49910 485 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 SPIRE1Q08AE8 756 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 DPYDQ12882 1025 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 GRB10Q13322 594 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 NAALADL2Q58DX5 795 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 CT47A1Q5JQC4 288 aaPredicted RBP13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 NLRX1Q86UT6 975 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 NCAPG2Q86XI2 1143 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 RNF214Q8ND24 703 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 BRI3BPQ8WY22 251 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 CCDC47Q96A33 483 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 GPRASP2Q96D09 838 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 CDHR1Q96JP9 859 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 BPIFA3Q9BQP9 254 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 TEKT3Q9BXF9 490 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 MOV10L1Q9BXT6 1211 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 DNAJC25Q9H1X3 360 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 ZCCHC17Q9NP64 241 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 KBTBD4Q9NVX7 518 aa13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 ADD3Q9UEY8 706 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-210ENST00000504677 PASKQ96RG2 1323 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 LOC102724159A0A0B4J2E5 919 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 TESPA1A2RU30 521 aaPredicted RBP13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 BTBD19C9JJ37 291 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 IPO5O00410 1097 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 FOXN1O15353 648 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 PSMD10O75832 226 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 NR3C2P08235 984 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 PRR29P0C7W0 189 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 XRCC6P12956 609 aaKnown RBP eCLIP13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 ERCC3P19447 782 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 AFMP43652 599 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 ERVK-9P63128 1117 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 ERVK-24P63145 666 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 MTMR1Q13613 665 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 PWP2Q15269 919 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 GNPTABQ3T906 1256 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 NCAPH2Q6IBW4 605 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 POTEEQ6S8J3 1075 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 VSIG10LQ86VR7 867 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 RASAL3Q86YV0 1011 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 MLKLQ8NB16 471 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 IL31RAQ8NI17 732 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 CYP2W1Q8TAV3 490 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 NEK9Q8TD19 979 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 LARP4BQ92615 738 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 RAD54LQ92698 747 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 TBC1D22BQ9NU19 505 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 RBPJLQ9UBG7 517 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 TCEAL9Q9UHQ7 104 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 MAN1B1Q9UKM7 699 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 LOXHD1Q8IVV2 1947 aa13.4□□□□□ -0.26
POLR2J3-210ENST00000504677 MANSC4A6NHS7 340 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 MYCLP12524 364 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 ITGB5P18084 799 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 RPA1P27694 616 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 MRPS9P82933 396 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 MORC3Q14149 939 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 SV2BQ7L1I2 683 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 OTOP1Q7RTM1 612 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 GRAMD1CQ8IYS0 662 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 GPRC5AQ8NFJ5 357 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 ERCC4Q92889 916 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 PNMA5Q96PV4 448 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 POLR3CQ9BUI4 534 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 CBX8Q9HC52 389 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 AGO4Q9HCK5 861 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 TUFT1Q9NNX1 390 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 KCNH7Q9NS40 1196 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 MORF4L1Q9UBU8 362 aa13.39□□□□□ -0.27
POLR2J3-210ENST00000504677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.38□□□□□ -0.27
POLR2J3-210ENST00000504677 BECN2A8MW95 431 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms