RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 PCDHA1Q9Y5I3 950 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 PNMA6FA0A0J9YX94 578 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 TRIM43BA6NCK2 446 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 RCCD1A6NED2 376 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 CCDC69A6NI79 296 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 NRG2O14511 850 aaPredicted RBP9.28□□□□□ -0.92
RFC1-207ENST00000504554 DYNC1LI2O43237 492 aaPredicted RBP9.28□□□□□ -0.92
RFC1-207ENST00000504554 CFBP00751 764 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 ITGB8P26012 769 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 HOXA13P31271 388 aaPredicted RBP9.28□□□□□ -0.92
RFC1-207ENST00000504554 MAGEA10P43363 369 aaPredicted RBP9.28□□□□□ -0.92
RFC1-207ENST00000504554 HSD17B4P51659 736 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 ERICH6BQ5W0A0 696 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 IQSEC1Q6DN90 963 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 TRAF7Q6Q0C0 670 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 NFXL1Q6ZNB6 911 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 DHX32Q7L7V1 743 aaKnown RBP9.28□□□□□ -0.92
RFC1-207ENST00000504554 TLK2Q86UE8 772 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 DNERQ8NFT8 737 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 IL31RAQ8NI17 732 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 NLRP7Q8WX94 980 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 TRIM43Q96BQ3 446 aaPredicted RBP9.28□□□□□ -0.92
RFC1-207ENST00000504554 TSEN34Q9BSV6 310 aaKnown RBP9.28□□□□□ -0.92
RFC1-207ENST00000504554 SPZ1Q9BXG8 430 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 WDR11Q9BZH6 1224 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 ADD3Q9UEY8 706 aaKnown RBP9.28□□□□□ -0.92
RFC1-207ENST00000504554 PNMA2Q9UL42 364 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 PCDHB3Q9Y5E6 796 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 MCM3APO60318 1980 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 GRIN2DO15399 1336 aa9.28□□□□□ -0.92
RFC1-207ENST00000504554 MOXD2PA6NHM9 499 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 RBAK-RBAKDNI3L0D1 243 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 CENPBP07199 599 aaPredicted RBP9.27□□□□□ -0.93
RFC1-207ENST00000504554 EIF2AK2P19525 551 aaKnown RBP9.27□□□□□ -0.93
RFC1-207ENST00000504554 CDK7P50613 346 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 FXR1P51114 621 aaKnown RBP eCLIP9.27□□□□□ -0.93
RFC1-207ENST00000504554 TLE2Q04725 743 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 FUT2Q10981 343 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 DUSP28Q4G0W2 176 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 GNASQ5JWF2 1037 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 RNF20Q5VTR2 975 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 C1orf53Q5VUE5 145 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 APOA5Q6Q788 366 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 BLOC1S3Q6QNY0 202 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 TMTC3Q6ZXV5 915 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 NOL8Q76FK4 1167 aaKnown RBP9.27□□□□□ -0.93
RFC1-207ENST00000504554 MICU3Q86XE3 530 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 TMTC2Q8N394 836 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 CCDC82Q8N4S0 544 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 FANCBQ8NB91 859 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 CTCFLQ8NI51 663 aaPredicted RBP9.27□□□□□ -0.93
RFC1-207ENST00000504554 PPP1R13LQ8WUF5 828 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 JAKMIP1Q96N16 626 aaKnown RBP9.27□□□□□ -0.93
RFC1-207ENST00000504554 RMDN3Q96TC7 470 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 PRR14Q9BWN1 585 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 TMEM134Q9H6X4 195 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 PDLIM7Q9NR12 457 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 PXMP2Q9NR77 195 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 SLC12A7Q9Y666 1083 aa9.27□□□□□ -0.93
RFC1-207ENST00000504554 LOC102724159A0A0B4J2E5 919 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 SOX1O00570 391 aaPredicted RBP9.26□□□□□ -0.93
RFC1-207ENST00000504554 PQBP1O60828 265 aaKnown RBP9.26□□□□□ -0.93
RFC1-207ENST00000504554 CDC27P30260 824 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 GGCXP38435 758 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 PSMC6P62333 389 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 APOBRQ0VD83 1088 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 FAAP100Q0VG06 881 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 PWP2Q15269 919 aaKnown RBP9.26□□□□□ -0.93
RFC1-207ENST00000504554 FSCN1Q16658 493 aaKnown RBP9.26□□□□□ -0.93
RFC1-207ENST00000504554 LY6KQ17RY6 165 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 CCDC62Q6P9F0 684 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 CXCL17Q6UXB2 119 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 MCF2L2Q86YR7 1114 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 NSUN6Q8TEA1 469 aaKnown RBP9.26□□□□□ -0.93
RFC1-207ENST00000504554 GPKOWQ92917 476 aaPredicted RBP eCLIP9.26□□□□□ -0.93
RFC1-207ENST00000504554 PDCD2LQ9BRP1 358 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 USP26Q9BXU7 913 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 STARD7Q9NQZ5 370 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 CNTNAP5Q8WYK1 1306 aa9.26□□□□□ -0.93
RFC1-207ENST00000504554 KLF18A0A0U1RQI7 1052 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 GCOM1H8Y6P7 765 aaPredicted RBP9.25□□□□□ -0.93
RFC1-207ENST00000504554 MEIS2O14770 477 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 ADAMTS3O15072 1205 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 NR3C2P08235 984 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 POLR2MP0CAP2 368 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 RPS6KB1P23443 525 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 SMARCA1P28370 1054 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 KIF5BP33176 963 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 BMP8BP34820 402 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 PGM5Q15124 567 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 ARHGEF16Q5VV41 709 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 MYSM1Q5VVJ2 828 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 USP17L6PQ6QN14 398 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 SEPT14Q6ZU15 432 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 Q6ZUG5 572 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 ANKRD33Q7Z3H0 272 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 FCHSD1Q86WN1 690 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 SLC43A3Q8NBI5 491 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 OR6J1Q8NGC5 347 aa9.25□□□□□ -0.93
RFC1-207ENST00000504554 RRP36Q96EU6 259 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms