RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 CRKP46108 304 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 TDRD10Q5VZ19 366 aaKnown RBP3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 MILR1Q7Z6M3 343 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 RALYLQ86SE5 291 aaKnown RBP3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 SLITRK4Q8IW52 837 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 PLEKHO2Q8TD55 490 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 NKD1Q969G9 470 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 ZSWIM3Q96MP5 696 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 FAM161BQ96MY7 647 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 TM9SF2Q99805 663 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 ADAM29Q9UKF5 820 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 ZNF451Q9Y4E5 1061 aa3.78□□□□□ -1.8
HMGB3P17-201ENST00000504195 NUDT3O95989 172 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 ACO1P21399 889 aaKnown RBP3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 GRB10Q13322 594 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 PPP2R5DQ14738 602 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 CR1LQ2VPA4 569 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 MROH9Q5TGP6 573 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 AGBL4Q5VU57 503 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 ZNF627Q7L945 461 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 CPNE8Q86YQ8 564 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 IFNL2Q8IZJ0 200 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 CLIP3Q96DZ5 547 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 ZNF764Q96H86 408 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 TMEM209Q96SK2 561 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 BRIP1Q9BX63 1249 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 NT5C1AQ9BXI3 368 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 VTI1BQ9UEU0 232 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 CROTQ9UKG9 612 aa3.77□□□□□ -1.81
HMGB3P17-201ENST00000504195 TMEM191CA6NGB0 347 aa3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 CNOT4O95628 575 aaKnown RBP3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 CTGFP29279 349 aa3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 MLLT6P55198 1093 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 AMPD2Q01433 879 aa3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 FSTL1Q12841 308 aa3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 CHRNA2Q15822 529 aa3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 PPFIBP1Q86W92 1011 aa3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 RIOX2Q8IUF8 465 aa3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 FAM89AQ96GI7 184 aa3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 TOE1Q96GM8 510 aaKnown RBP3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 MMP19Q99542 508 aa3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 GBP3Q9H0R5 595 aa3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 TMEFF2Q9UIK5 374 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P17-201ENST00000504195 A0A0A6YYK5 440 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 FAM86C2PA6NEL3 165 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 STXBP3O00186 592 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 PPM1BO75688 479 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 TP53P04637 393 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 CHGBP05060 677 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 STAT5AP42229 794 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 C21orf58P58505 322 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 ZNF568Q3ZCX4 644 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 FNDC7Q5VTL7 733 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 TRMT10BQ6PF06 316 aaKnown RBP3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 SYCE2Q6PIF2 218 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 DNAJC14Q6Y2X3 702 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 IL17DQ8TAD2 202 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 ZCCHC14Q8WYQ9 949 aaKnown RBP3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 SLC2A4RGQ9NR83 387 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 UBP1Q9NZI7 540 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 MARCH2Q9P0N8 246 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 ZNF214Q9UL59 606 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 ZNRF3Q9ULT6 936 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 SLC4A7Q9Y6M7 1214 aa3.75□□□□□ -1.81
HMGB3P17-201ENST00000504195 C22orf46C9J442 243 aa3.74□□□□□ -1.81
HMGB3P17-201ENST00000504195 ACRV1P26436 265 aa3.74□□□□□ -1.81
HMGB3P17-201ENST00000504195 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P17-201ENST00000504195 FBXO33Q7Z6M2 555 aa3.74□□□□□ -1.81
HMGB3P17-201ENST00000504195 TAX1BP1Q86VP1 789 aa3.74□□□□□ -1.81
HMGB3P17-201ENST00000504195 RCC1LQ96I51 464 aaKnown RBP3.74□□□□□ -1.81
HMGB3P17-201ENST00000504195 MCMBPQ9BTE3 642 aa3.74□□□□□ -1.81
HMGB3P17-201ENST00000504195 COPRSQ9NQ92 184 aa3.74□□□□□ -1.81
HMGB3P17-201ENST00000504195 DTLQ9NZJ0 730 aa3.74□□□□□ -1.81
HMGB3P17-201ENST00000504195 ZNF652Q9Y2D9 606 aa3.74□□□□□ -1.81
HMGB3P17-201ENST00000504195 SLC12A7Q9Y666 1083 aa3.74□□□□□ -1.81
HMGB3P17-201ENST00000504195 INO80B-WBP1J3KQ70 363 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 FOXN1O15353 648 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 CBFA2T2O43439 604 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 VAMP4O75379 141 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 THBDP07204 575 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 GUCY2CP25092 1073 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 DNAJA1P31689 397 aaKnown RBP3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 ADRA1BP35368 520 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 GTF2A2P52657 109 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 DPY19L1Q2PZI1 675 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 PAPD7Q5XG87 772 aaKnown RBP3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 UNC5AQ6ZN44 842 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 POLNQ7Z5Q5 900 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 FUKQ8N0W3 1084 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 INO80BQ9C086 356 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 AURKAIP1Q9NWT8 199 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 HSPBP1Q9NZL4 362 aa3.73□□□□□ -1.81
HMGB3P17-201ENST00000504195 PLSCR1O15162 318 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 ERCC3P19447 782 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 COL10A1Q03692 680 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 HEATR6Q6AI08 1181 aaKnown RBP3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 IQCEQ6IPM2 695 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 TEPPQ6URK8 271 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 Q6ZUG5 572 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 HS2ST1Q7LGA3 356 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms