RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 FBXO38Q6PIJ6 1188 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 STXBP4Q6ZWJ1 553 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 USP37Q86T82 979 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 CDR2LQ86X02 465 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-204ENST00000504131 TMEM87BQ96K49 555 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 TRIM45Q9H8W5 580 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-204ENST00000504131 STMN3Q9NZ72 180 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 IQANK1A0A1B0GTG1 560 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 WBP4O75554 376 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 PRKAR2AP13861 404 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 ATXN3P54252 364 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 STX17P56962 302 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 P3H1Q32P28 736 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 RIC3Q7Z5B4 369 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 ANKLE2Q86XL3 938 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 TATDN2Q93075 761 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 NRBF2Q96F24 287 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 SENP3Q9H4L4 574 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 C10orf88Q9H8K7 445 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 NCKAP5LQ9HCH0 1330 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 KIF15Q9NS87 1388 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 ZNF215Q9UL58 517 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 PLCL2Q9UPR0 1127 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 SAMM50Q9Y512 469 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 F5H423 210 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 PSMD11O00231 422 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 RASGRP1O95267 797 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 CALM1P0DP23 149 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 CALM2P0DP24 149 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 CALM3P0DP25 149 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 TRIM23P36406 574 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 OCA2Q04671 838 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 KCTD21Q4G0X4 260 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 LUZP2Q86TE4 346 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 ZNF496Q96IT1 587 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 ZBTB40Q9NUA8 1239 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 BTBD11A6QL63 1104 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 HNRNPRO43390 633 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 GSDMDP57764 484 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 USH1GQ495M9 461 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 C1orf94Q6P1W5 598 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 CCDC13Q8IYE1 715 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 SYCE1Q8N0S2 351 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 LRRC47Q8N1G4 583 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 JAKMIP1Q96N16 626 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 USP28Q96RU2 1077 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 OLFM1Q99784 485 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 BHMT2Q9H2M3 363 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 GINM1Q9NU53 330 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 SPATA2Q9UM82 520 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 DDX58O95786 925 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 ATF7P17544 494 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 ST5P78524 1137 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 PHEXP78562 749 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 NONOQ15233 471 aaKnown RBP eCLIP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 GLE1Q53GS7 698 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 DAB2IPQ5VWQ8 1189 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 CCDC62Q6P9F0 684 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 UNC5DQ6UXZ4 953 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 APPL2Q8NEU8 664 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 TEX13BQ9BXU2 312 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 CEP44Q9C0F1 390 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 RPRD1BQ9NQG5 326 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 WARS2Q9UGM6 360 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 KIF7Q2M1P5 1343 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 TMEM247A6NEH6 219 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 H3BQV1 296 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 CTNNA2P26232 953 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 SERPINB3P29508 390 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 RARSP54136 660 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 NLRP6P59044 892 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 SPIRE1Q08AE8 756 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 APOBRQ0VD83 1088 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 IL31Q6EBC2 164 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 RNF207Q6ZRF8 634 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 SMG7Q92540 1137 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 RRP36Q96EU6 259 aaKnown RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 FAM204AQ9H8W3 233 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 MALT1Q9UDY8 824 aa6.76□□□□□ -1.33
CLCN3-204ENST00000504131 PACSIN2Q9UNF0 486 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-204ENST00000504131 A0A0B4J203 849 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ENC1O14682 589 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 MYBL1P10243 752 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 TCP1P17987 556 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 HOXD11P31277 338 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 STIM1Q13586 685 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 FIP1L1Q6UN15 594 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 LRRC31Q6UY01 552 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 SPIRE2Q8WWL2 714 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ARHGAP45Q92619 1136 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 HDAC2Q92769 488 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 GDPD2Q9HCC8 539 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 RIC8AQ9NPQ8 531 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.75□□□□□ -1.331e-6■■■□□ 15.4
CLCN3-204ENST00000504131 RTEL1Q9NZ71 1219 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ARHGEF37A1IGU5 675 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 DNALI1O14645 258 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 SIN3BO75182 1162 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 PLA2G4AP47712 749 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms