RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 EMID1Q96A84 441 aaPredicted RBP28.65■■■□□ 2.18
LSM6-202ENST00000502781 MXRA8Q9BRK3 442 aa28.65■■■□□ 2.18
LSM6-202ENST00000502781 PHF24Q9UPV7 400 aa28.65■■■□□ 2.18
LSM6-202ENST00000502781 MAFGO15525 162 aa28.64■■■□□ 2.18
LSM6-202ENST00000502781 UBA1P22314 1058 aaKnown RBP28.64■■■□□ 2.18
LSM6-202ENST00000502781 FSCN1Q16658 493 aaKnown RBP28.64■■■□□ 2.18
LSM6-202ENST00000502781 CEP55Q53EZ4 464 aa28.64■■■□□ 2.18
LSM6-202ENST00000502781 GNASQ5JWF2 1037 aa28.64■■■□□ 2.18
LSM6-202ENST00000502781 KRT25Q7Z3Z0 450 aa28.64■■■□□ 2.18
LSM6-202ENST00000502781 CYP2W1Q8TAV3 490 aa28.64■■■□□ 2.18
LSM6-202ENST00000502781 TNFRSF25Q93038 417 aa28.64■■■□□ 2.18
LSM6-202ENST00000502781 CDHR1Q96JP9 859 aa28.64■■■□□ 2.18
LSM6-202ENST00000502781 SENP7Q9BQF6 1050 aa28.64■■■□□ 2.18
LSM6-202ENST00000502781 C11orf49Q9H6J7 331 aa28.64■■■□□ 2.18
LSM6-202ENST00000502781 MKI67P46013 3256 aaKnown RBP28.64■■■□□ 2.18
LSM6-202ENST00000502781 MOXD2PA6NHM9 499 aa28.63■■■□□ 2.17
LSM6-202ENST00000502781 A6NJR5 290 aa28.63■■■□□ 2.17
LSM6-202ENST00000502781 MEIS1O00470 390 aa28.63■■■□□ 2.17
LSM6-202ENST00000502781 CIITAP33076 1130 aa28.63■■■□□ 2.17
LSM6-202ENST00000502781 KCNA10Q16322 511 aa28.63■■■□□ 2.17
LSM6-202ENST00000502781 NIPA1Q7RTP0 329 aa28.63■■■□□ 2.17
LSM6-202ENST00000502781 FAM184AQ8NB25 1140 aa28.63■■■□□ 2.17
LSM6-202ENST00000502781 PCSK9Q8NBP7 692 aaKnown RBP28.63■■■□□ 2.17
LSM6-202ENST00000502781 FBXO18Q8NFZ0 1043 aa28.63■■■□□ 2.17
LSM6-202ENST00000502781 OR6J1Q8NGC5 347 aa28.63■■■□□ 2.17
LSM6-202ENST00000502781 FAM86B1E9PN63 330 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 MYCNP04198 464 aaPredicted RBP28.62■■■□□ 2.17
LSM6-202ENST00000502781 FAM86B2P0C5J1 330 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 USP11P51784 963 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 BEX3Q00994 111 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 TRIM29Q14134 588 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 CELF3Q5SZQ8 465 aaKnown RBP28.62■■■□□ 2.17
LSM6-202ENST00000502781 MYSM1Q5VVJ2 828 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 TBCKQ8TEA7 893 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 C8orf76Q96K31 380 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 IGLV3-22A0A075B6J6 115 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 K7ELQ4 463 aaPredicted RBP28.62■■■□□ 2.17
LSM6-202ENST00000502781 KRT2P35908 639 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 ACLYP53396 1101 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 MTMR1Q13613 665 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 NONOQ15233 471 aaKnown RBP eCLIP28.62■■■□□ 2.17
LSM6-202ENST00000502781 BRMS1Q9HCU9 246 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 KCNH7Q9NS40 1196 aa28.62■■■□□ 2.17
LSM6-202ENST00000502781 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.62■■■□□ 2.17
LSM6-202ENST00000502781 ASGR1P07306 291 aa28.61■■■□□ 2.17
LSM6-202ENST00000502781 CPT1AP50416 773 aa28.61■■■□□ 2.17
LSM6-202ENST00000502781 NR5A1Q13285 461 aa28.61■■■□□ 2.17
LSM6-202ENST00000502781 LAMC2Q13753 1193 aa28.61■■■□□ 2.17
LSM6-202ENST00000502781 NEDD9Q14511 834 aa28.61■■■□□ 2.17
LSM6-202ENST00000502781 DIS3L2Q8IYB7 885 aaKnown RBP28.61■■■□□ 2.17
LSM6-202ENST00000502781 KIF3AQ9Y496 699 aa28.61■■■□□ 2.17
LSM6-202ENST00000502781 GGPS1O95749 300 aa28.6■■■□□ 2.17
LSM6-202ENST00000502781 KCNA2P16389 499 aa28.6■■■□□ 2.17
LSM6-202ENST00000502781 FOSBP53539 338 aa28.6■■■□□ 2.17
LSM6-202ENST00000502781 DHX37Q8IY37 1157 aaKnown RBP28.6■■■□□ 2.17
LSM6-202ENST00000502781 SENP6Q9GZR1 1112 aaPredicted RBP28.6■■■□□ 2.17
LSM6-202ENST00000502781 BCAS3Q9H6U6 928 aa28.6■■■□□ 2.17
LSM6-202ENST00000502781 MYH7BA7E2Y1 1941 aa28.6■■■□□ 2.17
LSM6-202ENST00000502781 A0A1W2PQ45 241 aaPredicted RBP28.59■■■□□ 2.17
LSM6-202ENST00000502781 A0A1W2PQY0 241 aa28.59■■■□□ 2.17
LSM6-202ENST00000502781 BTBD18B2RXH4 712 aa28.59■■■□□ 2.17
LSM6-202ENST00000502781 ATP9AO75110 1047 aa28.59■■■□□ 2.17
LSM6-202ENST00000502781 GJB2P29033 226 aa28.59■■■□□ 2.17
LSM6-202ENST00000502781 ZNF76P36508 570 aa28.59■■■□□ 2.17
LSM6-202ENST00000502781 EARS2Q5JPH6 523 aaKnown RBP28.59■■■□□ 2.17
LSM6-202ENST00000502781 METTL7BQ6UX53 244 aa28.59■■■□□ 2.17
LSM6-202ENST00000502781 PPTC7Q8NI37 304 aa28.59■■■□□ 2.17
LSM6-202ENST00000502781 AFG1LQ8WV93 481 aa28.59■■■□□ 2.17
LSM6-202ENST00000502781 CCDC194A0A1B0GVG4 234 aa28.58■■■□□ 2.17
LSM6-202ENST00000502781 ZEB2O60315 1214 aa28.58■■■□□ 2.17
LSM6-202ENST00000502781 ARP10275 920 aa28.58■■■□□ 2.17
LSM6-202ENST00000502781 HOXD8P13378 290 aaPredicted RBP28.58■■■□□ 2.17
LSM6-202ENST00000502781 GUCY1B3Q02153 619 aa28.58■■■□□ 2.17
LSM6-202ENST00000502781 LENG9Q96B70 501 aa28.58■■■□□ 2.17
LSM6-202ENST00000502781 INTS4Q96HW7 963 aaKnown RBP28.58■■■□□ 2.17
LSM6-202ENST00000502781 SMC3Q9UQE7 1217 aa28.58■■■□□ 2.17
LSM6-202ENST00000502781 CYP3A7-CYP3A51PA0A087WV96 503 aa28.57■■■□□ 2.16
LSM6-202ENST00000502781 MMP3P08254 477 aa28.57■■■□□ 2.16
LSM6-202ENST00000502781 CYP3A7P24462 503 aa28.57■■■□□ 2.16
LSM6-202ENST00000502781 INF2Q27J81 1249 aa28.57■■■□□ 2.16
LSM6-202ENST00000502781 HSDL1Q3SXM5 330 aa28.57■■■□□ 2.16
LSM6-202ENST00000502781 BRDTQ58F21 947 aaPredicted RBP28.57■■■□□ 2.16
LSM6-202ENST00000502781 MOXD1Q6UVY6 613 aa28.57■■■□□ 2.16
LSM6-202ENST00000502781 PIK3AP1Q6ZUJ8 805 aa28.57■■■□□ 2.16
LSM6-202ENST00000502781 PLA2G4DQ86XP0 818 aa28.57■■■□□ 2.16
LSM6-202ENST00000502781 GIMAP8Q8ND71 665 aaPredicted RBP28.57■■■□□ 2.16
LSM6-202ENST00000502781 FERMT2Q96AC1 680 aa28.57■■■□□ 2.16
LSM6-202ENST00000502781 MBOAT7Q96N66 472 aa28.57■■■□□ 2.16
LSM6-202ENST00000502781 ELP1O95163 1332 aa28.56■■■□□ 2.16
LSM6-202ENST00000502781 PURAQ00577 322 aaKnown RBP28.56■■■□□ 2.16
LSM6-202ENST00000502781 SETQ01105 290 aaPredicted RBP28.56■■■□□ 2.16
LSM6-202ENST00000502781 CYFIP1Q7L576 1253 aa28.56■■■□□ 2.16
LSM6-202ENST00000502781 SPATA33Q96N06 139 aa28.56■■■□□ 2.16
LSM6-202ENST00000502781 MLXIPQ9HAP2 919 aa28.56■■■□□ 2.16
LSM6-202ENST00000502781 AGO4Q9HCK5 861 aaKnown RBP28.56■■■□□ 2.16
LSM6-202ENST00000502781 KPNA6O60684 536 aa28.55■■■□□ 2.16
LSM6-202ENST00000502781 CABYRO75952 493 aa28.55■■■□□ 2.16
LSM6-202ENST00000502781 SNX17Q15036 470 aa28.55■■■□□ 2.16
LSM6-202ENST00000502781 SAFBQ15424 915 aaKnown RBP eCLIP28.55■■■□□ 2.16
LSM6-202ENST00000502781 C1orf53Q5VUE5 145 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms