RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 FGD4Q96M96 766 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 NKIRAS2Q9NYR9 191 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 SRPK3Q9UPE1 567 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 CORINQ9Y5Q5 1042 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 NACADO15069 1562 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 A0A087WV62 115 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 KLHL33A6NCF5 533 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 TBX1O43435 398 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 SLITRK5O94991 958 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 FGFR1P11362 822 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 MX2P20592 715 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 PBX2P40425 430 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 PIK3CBP42338 1070 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 TUBP50607 506 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 SKOR1P84550 965 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 PRKG1Q13976 671 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 HSP90B2PQ58FF3 399 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 FAM205BPQ63HN1 556 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 NCAPG2Q86XI2 1143 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 NRSN1Q8IZ57 195 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 PLD6Q8N2A8 252 aaKnown RBP4.27□□□□□ -1.73
SUB1-202ENST00000502453 ATG16L2Q8NAA4 619 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 CLRN3Q8NCR9 226 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 DHX36Q9H2U1 1008 aaKnown RBP4.27□□□□□ -1.73
SUB1-202ENST00000502453 OLA1Q9NTK5 396 aaKnown RBP4.27□□□□□ -1.73
SUB1-202ENST00000502453 HAUS2Q9NVX0 235 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 GRHPRQ9UBQ7 328 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 CEP83Q9Y592 693 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 PCDHA9Q9Y5H5 950 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 LOC102724428A0A0B4J2F2 783 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 HSPA4LO95757 839 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 ZBED1O96006 694 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 ITGAVP06756 1048 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 RPL17P18621 184 aaKnown RBP4.27□□□□□ -1.73
SUB1-202ENST00000502453 FXR1P51114 621 aaKnown RBP eCLIP4.27□□□□□ -1.73
SUB1-202ENST00000502453 PMS1P54277 932 aaKnown RBP4.27□□□□□ -1.73
SUB1-202ENST00000502453 SIK1P57059 783 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 PPP2R5DQ14738 602 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 MSS51Q4VC12 460 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 FAM209BQ5JX69 171 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 TMEM240Q5SV17 173 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 CCDC73Q6ZRK6 1079 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 MFSD6Q6ZSS7 791 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 PPFIBP1Q86W92 1011 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 VSIG1Q86XK7 387 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 MIER2Q8N344 545 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 TMEM40Q8WWA1 233 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 ASB12Q8WXK4 309 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 KLHL6Q8WZ60 621 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 USP13Q92995 863 aaPredicted RBP4.27□□□□□ -1.73
SUB1-202ENST00000502453 KCTD12Q96CX2 325 aaKnown RBP4.27□□□□□ -1.73
SUB1-202ENST00000502453 RSRC1Q96IZ7 334 aaKnown RBP4.27□□□□□ -1.73
SUB1-202ENST00000502453 TEKT5Q96M29 485 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 SLC2A13Q96QE2 648 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 PRR14Q9BWN1 585 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 C11orf16Q9NQ32 467 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 COMMD8Q9NX08 183 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 EIF2B4Q9UI10 523 aaKnown RBP4.27□□□□□ -1.73
SUB1-202ENST00000502453 ZKSCAN5Q9Y2L8 839 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 RHPN2P1A8MT19 583 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 F8W031 263 aaPredicted RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 PPEF1O14829 653 aaPredicted RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 AREL1O15033 823 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 ZBED4O75132 1171 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 DHRS4L1P0CG22 281 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 XBP1P17861 261 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 POU3F2P20265 443 aaPredicted RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 ABCD1P33897 745 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 STAT1P42224 750 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 BLMHQ13867 455 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 STARD3Q14849 445 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 GALNT17Q6IS24 598 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 NFXL1Q6ZNB6 911 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 KDELC2Q7Z4H8 507 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 ADAT2Q7Z6V5 191 aaKnown RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 CCDC33Q8N5R6 958 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 PPP1R14CQ8TAE6 165 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 SUSD3Q96L08 255 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 SORBS1Q9BX66 1292 aaKnown RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 NIFKQ9BYG3 293 aaKnown RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 TRIM6Q9C030 488 aaPredicted RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 LMAN2LQ9H0V9 348 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 ELAC1Q9H777 363 aaKnown RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 SALL4Q9UJQ4 1053 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 SLC12A7Q9Y666 1083 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 A0A0G2JS52 829 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 MEN1O00255 615 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 B3GALNT1O75752 331 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 STARD3NLO95772 234 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 ATF7P17544 494 aaPredicted RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 RPS6KB1P23443 525 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 CDK8P49336 464 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 HIRAP54198 1017 aaPredicted RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 POLR2FP61218 127 aaKnown RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 KCNC4Q03721 635 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 CCDC15Q0P6D6 951 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 PKN2Q16513 984 aaKnown RBP4.26□□□□□ -1.73
SUB1-202ENST00000502453 INAVAQ3KP66 663 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 OVOS1Q6IE37 1185 aa4.26□□□□□ -1.73
SUB1-202ENST00000502453 TMEM214Q6NUQ4 689 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms