RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 PXMP2Q9NR77 195 aa17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 MRPL11Q9Y3B7 192 aaKnown RBP17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 MRVI1Q9Y6F6 885 aa17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 RALGAPA2Q2PPJ7 1873 aa17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 B4E1Z4 1266 aa17.1■□□□□ 0.33
SEC61A1-207ENST00000498837 OPLAHO14841 1288 aa17.1■□□□□ 0.33
SEC61A1-207ENST00000498837 DHX16O60231 1041 aaKnown RBP17.1■□□□□ 0.33
SEC61A1-207ENST00000498837 RGS20O76081 388 aa17.1■□□□□ 0.33
SEC61A1-207ENST00000498837 ASPRV1Q53RT3 343 aa17.1■□□□□ 0.33
SEC61A1-207ENST00000498837 IQCA1Q86XH1 822 aa17.1■□□□□ 0.33
SEC61A1-207ENST00000498837 PPTC7Q8NI37 304 aa17.1■□□□□ 0.33
SEC61A1-207ENST00000498837 ANKS1AQ92625 1134 aa17.1■□□□□ 0.33
SEC61A1-207ENST00000498837 C17orf80Q9BSJ5 609 aa17.1■□□□□ 0.33
SEC61A1-207ENST00000498837 ARIH1Q9Y4X5 557 aaPredicted RBP17.1■□□□□ 0.33
SEC61A1-207ENST00000498837 PI4K2BG5E9Z4 385 aa17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 EFCAB14O75071 495 aa17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 LGR5O75473 907 aa17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 SDSP20132 328 aa17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 HSDL1Q3SXM5 330 aa17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 CCDC178Q5BJE1 867 aa17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 MYSM1Q5VVJ2 828 aa17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 ENAHQ8N8S7 591 aaPredicted RBP17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 DBF4BQ8NFT6 615 aa17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 ZSCAN10Q96SZ4 725 aaPredicted RBP17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 LNPKQ9C0E8 428 aa17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 ZSWIM5Q9P217 1185 aa17.09■□□□□ 0.33
SEC61A1-207ENST00000498837 PIEZO1Q92508 2521 aa17.08■□□□□ 0.33
SEC61A1-207ENST00000498837 PARP1P09874 1014 aaKnown RBP17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 MYCLP12524 364 aaPredicted RBP17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 HOXD8P13378 290 aaPredicted RBP17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 KCNA5P22460 613 aa17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 HSD17B4P51659 736 aa17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 FAM178BQ8IXR5 827 aa17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 STAG2Q8N3U4 1231 aa17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 FBXO22Q8NEZ5 403 aa17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 PDCD2LQ9BRP1 358 aa17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 INSL6Q9Y581 213 aa17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 LOXHD1Q8IVV2 1947 aa17.08■□□□□ 0.32
SEC61A1-207ENST00000498837 PPFIA4O75335 1185 aa17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 IL9P15248 144 aa17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 SP2Q02086 613 aa17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 HDAC1Q13547 482 aaPredicted RBP17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 LEXMQ3ZCV2 418 aa17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 CELF3Q5SZQ8 465 aaKnown RBP17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 MYOCDQ8IZQ8 938 aa17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 IL31RAQ8NI17 732 aa17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 ZFP91Q96JP5 570 aaPredicted RBP17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 SPATA33Q96N06 139 aa17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 C5orf42Q9H799 3197 aa17.07■□□□□ 0.32
SEC61A1-207ENST00000498837 RSPH10B2B2RC85 870 aa17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 PPP1R11O60927 126 aaPredicted RBP17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 GGPS1O95749 300 aa17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 RSPH10BP0C881 870 aa17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 THPOP40225 353 aa17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 RRP1P56182 461 aaKnown RBP17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 HTRA4P83105 476 aaPredicted RBP17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 CWC27Q6UX04 472 aaKnown RBP17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 STOX1Q6ZVD7 989 aa17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 SERINC5Q86VE9 423 aa17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 GJD3Q8N144 294 aa17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 GPKOWQ92917 476 aaPredicted RBP eCLIP17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 C16orf70Q9BSU1 422 aa17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 AMNQ9BXJ7 453 aa17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 OSBPL7Q9BZF2 842 aa17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 BCAS3Q9H6U6 928 aa17.06■□□□□ 0.32
SEC61A1-207ENST00000498837 EMSYQ7Z589 1322 aa17.05■□□□□ 0.32
SEC61A1-207ENST00000498837 AMHP03971 560 aa17.05■□□□□ 0.32
SEC61A1-207ENST00000498837 HOXA13P31271 388 aaPredicted RBP17.05■□□□□ 0.32
SEC61A1-207ENST00000498837 GHRHRQ02643 423 aa17.05■□□□□ 0.32
SEC61A1-207ENST00000498837 PGM5Q15124 567 aa17.05■□□□□ 0.32
SEC61A1-207ENST00000498837 PLEKHG4Q58EX7 1191 aa17.05■□□□□ 0.32
SEC61A1-207ENST00000498837 PTCRAQ6ISU1 281 aaPredicted RBP17.05■□□□□ 0.32
SEC61A1-207ENST00000498837 VSIG10LQ86VR7 867 aa17.05■□□□□ 0.32
SEC61A1-207ENST00000498837 SP7Q8TDD2 431 aaPredicted RBP17.05■□□□□ 0.32
SEC61A1-207ENST00000498837 TRIOO75962 3097 aa17.05■□□□□ 0.32
SEC61A1-207ENST00000498837 UBA1P22314 1058 aaKnown RBP17.04■□□□□ 0.32
SEC61A1-207ENST00000498837 NT5C2P49902 561 aa17.04■□□□□ 0.32
SEC61A1-207ENST00000498837 EPC2Q52LR7 807 aa17.04■□□□□ 0.32
SEC61A1-207ENST00000498837 KCNV1Q6PIU1 500 aa17.04■□□□□ 0.32
SEC61A1-207ENST00000498837 ATP6V0A1Q93050 837 aa17.04■□□□□ 0.32
SEC61A1-207ENST00000498837 MRPL38Q96DV4 380 aaKnown RBP17.04■□□□□ 0.32
SEC61A1-207ENST00000498837 MTMR8Q96EF0 704 aa17.04■□□□□ 0.32
SEC61A1-207ENST00000498837 PCDHA1Q9Y5I3 950 aa17.04■□□□□ 0.32
SEC61A1-207ENST00000498837 C17orf102A2RUQ5 167 aa17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 GRXCR2A6NFK2 248 aa17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 KLRF2D3W0D1 207 aa17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 TREHO43280 583 aa17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 UPP2O95045 317 aa17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 SSTR3P32745 418 aaPredicted RBP17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 B4GALNT3Q6L9W6 998 aa17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 PLEKHM2Q8IWE5 1019 aa17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 RNPEPQ9H4A4 650 aa17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 MLXIPQ9HAP2 919 aa17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 MAP3K20Q9NYL2 800 aaKnown RBP17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 MAD2L2Q9UI95 211 aa17.03■□□□□ 0.32
SEC61A1-207ENST00000498837 H3BQ06 376 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms