RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 ZNF618Q5T7W0 954 aa14.04□□□□□ -0.16
THBS3-209ENST00000498500 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.04□□□□□ -0.16
THBS3-209ENST00000498500 MFSD6Q6ZSS7 791 aa14.04□□□□□ -0.16
THBS3-209ENST00000498500 MYOCDQ8IZQ8 938 aa14.04□□□□□ -0.16
THBS3-209ENST00000498500 MRPL38Q96DV4 380 aaKnown RBP14.04□□□□□ -0.16
THBS3-209ENST00000498500 RNF41Q9H4P4 317 aaPredicted RBP14.04□□□□□ -0.16
THBS3-209ENST00000498500 RBAK-RBAKDNI3L0D1 243 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 ZNF213O14771 459 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 LGR5O75473 907 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 NHLH1Q02575 133 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 ZNF543Q08ER8 600 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 MFSD10Q14728 455 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 STXBP2Q15833 593 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 KIAA0753Q2KHM9 967 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 TIGD5Q53EQ6 642 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 BMP2KLQ5H9B9 411 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 DHX37Q8IY37 1157 aaKnown RBP14.03□□□□□ -0.16
THBS3-209ENST00000498500 RGS22Q8NE09 1264 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 NEK9Q8TD19 979 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 NSUN6Q8TEA1 469 aaKnown RBP14.03□□□□□ -0.16
THBS3-209ENST00000498500 RUFY2Q8WXA3 655 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 TAAR1Q96RJ0 339 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 FAM50BQ9Y247 325 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 RALGAPA2Q2PPJ7 1873 aa14.03□□□□□ -0.16
THBS3-209ENST00000498500 EMSYQ7Z589 1322 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 B4E1Z4 1266 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 ZNF286BP0CG31 522 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 GPM6BQ13491 265 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 MBTPS1Q14703 1052 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 IMMTQ16891 758 aaKnown RBP14.02□□□□□ -0.17
THBS3-209ENST00000498500 EPC2Q52LR7 807 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 BANK1Q8NDB2 785 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 DBF4BQ8NFT6 615 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 TBC1D5Q92609 795 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 FBXL18Q96ME1 805 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 SAMD11Q96NU1 681 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 KCNH6Q9H252 994 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 TAF6LQ9Y6J9 622 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 WDFY4Q6ZS81 3184 aa14.02□□□□□ -0.17
THBS3-209ENST00000498500 MYO7AQ13402 2215 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 KDM4AO75164 1064 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 GOLGA8HP0CJ92 632 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 NT5C2P49902 561 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 HTRA4P83105 476 aaPredicted RBP14.01□□□□□ -0.17
THBS3-209ENST00000498500 ZNF200P98182 395 aaPredicted RBP14.01□□□□□ -0.17
THBS3-209ENST00000498500 LAMC2Q13753 1193 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 TRIM71Q2Q1W2 868 aaKnown RBP14.01□□□□□ -0.17
THBS3-209ENST00000498500 TRAF7Q6Q0C0 670 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 SYTL5Q8TDW5 730 aaPredicted RBP14.01□□□□□ -0.17
THBS3-209ENST00000498500 ESR2Q92731 530 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 WNT8BQ93098 351 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 PABPC5Q96DU9 382 aaKnown RBP14.01□□□□□ -0.17
THBS3-209ENST00000498500 CCDC136Q96JN2 1154 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 TTC14Q96N46 770 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 IWS1Q96ST2 819 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 YME1L1Q96TA2 773 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 RMDN3Q96TC7 470 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 UBA5Q9GZZ9 404 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 CPVLQ9H3G5 476 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 PRKAG3Q9UGI9 489 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 DDX41Q9UJV9 622 aaKnown RBP14.01□□□□□ -0.17
THBS3-209ENST00000498500 MRVI1Q9Y6F6 885 aa14.01□□□□□ -0.17
THBS3-209ENST00000498500 ATG2AQ2TAZ0 1938 aa14□□□□□ -0.17
THBS3-209ENST00000498500 ABCB11O95342 1321 aa14□□□□□ -0.17
THBS3-209ENST00000498500 POTEB3A0JP26 581 aa14□□□□□ -0.17
THBS3-209ENST00000498500 RSPH10B2B2RC85 870 aa14□□□□□ -0.17
THBS3-209ENST00000498500 H3BNC9 293 aa14□□□□□ -0.17
THBS3-209ENST00000498500 HAS3O00219 553 aa14□□□□□ -0.17
THBS3-209ENST00000498500 UPP2O95045 317 aa14□□□□□ -0.17
THBS3-209ENST00000498500 F2P00734 622 aa14□□□□□ -0.17
THBS3-209ENST00000498500 CYP21A2P08686 494 aa14□□□□□ -0.17
THBS3-209ENST00000498500 RSPH10BP0C881 870 aa14□□□□□ -0.17
THBS3-209ENST00000498500 SNHG28P0DPA3 235 aa14□□□□□ -0.17
THBS3-209ENST00000498500 THPOP40225 353 aa14□□□□□ -0.17
THBS3-209ENST00000498500 ZP2Q05996 745 aa14□□□□□ -0.17
THBS3-209ENST00000498500 TCEAL5Q5H9L2 206 aa14□□□□□ -0.17
THBS3-209ENST00000498500 GPATCH4Q5T3I0 446 aaKnown RBP14□□□□□ -0.17
THBS3-209ENST00000498500 ARHGEF16Q5VV41 709 aa14□□□□□ -0.17
THBS3-209ENST00000498500 POTEBQ6S5H4 581 aa14□□□□□ -0.17
THBS3-209ENST00000498500 MCF2L2Q86YR7 1114 aa14□□□□□ -0.17
THBS3-209ENST00000498500 PPTC7Q8NI37 304 aa14□□□□□ -0.17
THBS3-209ENST00000498500 SP7Q8TDD2 431 aaPredicted RBP14□□□□□ -0.17
THBS3-209ENST00000498500 ZKSCAN3Q9BRR0 538 aa14□□□□□ -0.17
THBS3-209ENST00000498500 ESYT1Q9BSJ8 1104 aa14□□□□□ -0.17
THBS3-209ENST00000498500 UPF3BQ9BZI7 483 aaKnown RBP14□□□□□ -0.17
THBS3-209ENST00000498500 MAF1Q9H063 256 aa14□□□□□ -0.17
THBS3-209ENST00000498500 LSG1Q9H089 658 aaKnown RBP14□□□□□ -0.17
THBS3-209ENST00000498500 CLDND1Q9NY35 253 aa14□□□□□ -0.17
THBS3-209ENST00000498500 COL20A1Q9P218 1284 aa14□□□□□ -0.17
THBS3-209ENST00000498500 KAT6AQ92794 2004 aa14□□□□□ -0.17
THBS3-209ENST00000498500 EIF3JO75822 258 aaKnown RBP13.99□□□□□ -0.17
THBS3-209ENST00000498500 NEFLP07196 543 aa13.99□□□□□ -0.17
THBS3-209ENST00000498500 EIF2AK2P19525 551 aaKnown RBP13.99□□□□□ -0.17
THBS3-209ENST00000498500 CDC37Q16543 378 aaPredicted RBP13.99□□□□□ -0.17
THBS3-209ENST00000498500 STOX1Q6ZVD7 989 aa13.99□□□□□ -0.17
THBS3-209ENST00000498500 TMEM192Q8IY95 271 aa13.99□□□□□ -0.17
THBS3-209ENST00000498500 ENAHQ8N8S7 591 aaPredicted RBP13.99□□□□□ -0.17
THBS3-209ENST00000498500 EMID1Q96A84 441 aaPredicted RBP13.99□□□□□ -0.17
THBS3-209ENST00000498500 NSUN3Q9H649 340 aaKnown RBP13.99□□□□□ -0.17
THBS3-209ENST00000498500 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms