RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 ATAD5Q96QE3 1844 aa13.87□□□□□ -0.19
AFF3-215ENST00000498090 KLRF2D3W0D1 207 aa13.87□□□□□ -0.19
AFF3-215ENST00000498090 TRAF5O00463 557 aa13.87□□□□□ -0.19
AFF3-215ENST00000498090 KLRC4O43908 158 aa13.87□□□□□ -0.19
AFF3-215ENST00000498090 CTNND1O60716 968 aaKnown RBP13.87□□□□□ -0.19
AFF3-215ENST00000498090 USP2O75604 605 aaPredicted RBP13.87□□□□□ -0.19
AFF3-215ENST00000498090 GPS2Q13227 327 aa13.87□□□□□ -0.19
AFF3-215ENST00000498090 NEK8Q86SG6 692 aa13.87□□□□□ -0.19
AFF3-215ENST00000498090 MSANTD4Q8NCY6 345 aa13.87□□□□□ -0.19
AFF3-215ENST00000498090 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.87□□□□□ -0.19
AFF3-215ENST00000498090 ACER1Q8TDN7 264 aa13.87□□□□□ -0.19
AFF3-215ENST00000498090 MKL1Q969V6 931 aa13.87□□□□□ -0.19
AFF3-215ENST00000498090 RAB21Q9UL25 225 aa13.87□□□□□ -0.19
AFF3-215ENST00000498090 DOCK1Q14185 1865 aa13.87□□□□□ -0.19
AFF3-215ENST00000498090 CYTH3O43739 400 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 ASNSP08243 561 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 CCNE1P24864 410 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 ECE1P42892 770 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 PLA2G4AP47712 749 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 NAPAP54920 295 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 ERVK-24P63145 666 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 INF2Q27J81 1249 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 FIGNQ5HY92 759 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 CNNM4Q6P4Q7 775 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 CABP7Q86V35 215 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 CCDC170Q8IYT3 715 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 SCYL3Q8IZE3 742 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 ZNF507Q8TCN5 953 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 ZKSCAN4Q969J2 545 aaPredicted RBP13.86□□□□□ -0.19
AFF3-215ENST00000498090 TRIM47Q96LD4 638 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 LRRC27Q9C0I9 530 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 ZNHIT6Q9NWK9 470 aaKnown RBP13.86□□□□□ -0.19
AFF3-215ENST00000498090 GDAQ9Y2T3 454 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 EPN1Q9Y6I3 576 aaPredicted RBP13.86□□□□□ -0.19
AFF3-215ENST00000498090 OTOFQ9HC10 1997 aa13.86□□□□□ -0.19
AFF3-215ENST00000498090 CTAGE15A4D2H0 777 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 USP17L5A8MUK1 530 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 NDUFA10O95299 355 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 TBC1D8O95759 1140 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 CTAGE8P0CG41 777 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 SNHG28P0DPA3 235 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 PDHBP11177 359 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 MCM3P25205 808 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 CDK17Q00537 523 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 FSTL1Q12841 308 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 MEA1Q16626 185 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 SLC35G1Q2M3R5 365 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 NOL9Q5SY16 702 aaKnown RBP13.85□□□□□ -0.19
AFF3-215ENST00000498090 TYW1BQ6NUM6 668 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 TTI2Q6NXR4 508 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 FOXR2Q6PJQ5 311 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 MOB2Q70IA6 237 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 CTAGE6Q86UF2 777 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 IRF2BP1Q8IU81 584 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 CTAGE4Q8IX94 777 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 SMC1BQ8NDV3 1235 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 RPGRIP1Q96KN7 1286 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 TMEM60Q9H2L4 133 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 EXOC1Q9NV70 894 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 STK17AQ9UEE5 414 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 ABCB11O95342 1321 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 A0A1W2PQJ5 194 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 IPO7O95373 1038 aaKnown RBP13.85□□□□□ -0.19
AFF3-215ENST00000498090 FGFR1OPO95684 399 aaKnown RBP13.85□□□□□ -0.19
AFF3-215ENST00000498090 ITGBL1O95965 494 aaPredicted RBP13.85□□□□□ -0.19
AFF3-215ENST00000498090 CYLC1P35663 651 aaPredicted RBP13.85□□□□□ -0.19
AFF3-215ENST00000498090 ARHGAP25P42331 645 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 KIAA1755Q5JYT7 1200 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 USP17L2Q6R6M4 530 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.85□□□□□ -0.19
AFF3-215ENST00000498090 SLC35F6Q8N357 371 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 P2RX5Q93086 422 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 CALML4Q96GE6 196 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 RAB34Q9BZG1 259 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 TRIM9Q9C026 710 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 GINM1Q9NU53 330 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 SNCAIPQ9Y6H5 919 aa13.85□□□□□ -0.19
AFF3-215ENST00000498090 MYH4Q9Y623 1939 aa13.84□□□□□ -0.19
AFF3-215ENST00000498090 SMCO2A6NFE2 343 aa13.84□□□□□ -0.19
AFF3-215ENST00000498090 NDUFB10O96000 172 aa13.84□□□□□ -0.19
AFF3-215ENST00000498090 GOLGA8HP0CJ92 632 aa13.84□□□□□ -0.19
AFF3-215ENST00000498090 VGLL4Q14135 290 aa13.84□□□□□ -0.19
AFF3-215ENST00000498090 PPP1R18Q6NYC8 613 aa13.84□□□□□ -0.19
AFF3-215ENST00000498090 CSGALNACT2Q8N6G5 542 aa13.84□□□□□ -0.19
AFF3-215ENST00000498090 RASGRP4Q8TDF6 673 aa13.84□□□□□ -0.19
AFF3-215ENST00000498090 ARHGEF10LQ9HCE6 1279 aa13.84□□□□□ -0.19
AFF3-215ENST00000498090 TMX2Q9Y320 296 aa13.84□□□□□ -0.19
AFF3-215ENST00000498090 FRMPD2Q68DX3 1309 aaPredicted RBP13.84□□□□□ -0.19
AFF3-215ENST00000498090 PVALEFA0A1B0GWK0 134 aa13.83□□□□□ -0.2
AFF3-215ENST00000498090 TTC26A0AVF1 554 aa13.83□□□□□ -0.2
AFF3-215ENST00000498090 ADAMTS3O15072 1205 aa13.83□□□□□ -0.2
AFF3-215ENST00000498090 KRT86O43790 486 aa13.83□□□□□ -0.2
AFF3-215ENST00000498090 CCNT1O60563 726 aaKnown RBP13.83□□□□□ -0.2
AFF3-215ENST00000498090 EIF3JO75822 258 aaKnown RBP13.83□□□□□ -0.2
AFF3-215ENST00000498090 PTPRAP18433 802 aa13.83□□□□□ -0.2
AFF3-215ENST00000498090 PLCG1P19174 1290 aa13.83□□□□□ -0.2
AFF3-215ENST00000498090 ZBED6P86452 979 aa13.83□□□□□ -0.2
AFF3-215ENST00000498090 TMEM266Q2M3C6 531 aa13.83□□□□□ -0.2
AFF3-215ENST00000498090 SLFN13Q68D06 897 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms