RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 FAM151AQ8WW52 585 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 HIF3AQ9Y2N7 669 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 AK9Q5TCS8 1911 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 CACNA1FO60840 1977 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 PTPRFP10586 1907 aa9.53□□□□□ -0.88
VPS45-210ENST00000497638 FRAT2O75474 233 aaPredicted RBP9.53□□□□□ -0.88
VPS45-210ENST00000497638 USP5P45974 858 aa9.53□□□□□ -0.88
VPS45-210ENST00000497638 IRAK1P51617 712 aa9.53□□□□□ -0.88
VPS45-210ENST00000497638 CHAF1AQ13111 956 aaPredicted RBP9.53□□□□□ -0.88
VPS45-210ENST00000497638 FAM110CQ1W6H9 321 aa9.53□□□□□ -0.88
VPS45-210ENST00000497638 FBXO33Q7Z6M2 555 aa9.53□□□□□ -0.88
VPS45-210ENST00000497638 C12orf50Q8NA57 414 aaPredicted RBP9.53□□□□□ -0.88
VPS45-210ENST00000497638 SHKBP1Q8TBC3 707 aa9.53□□□□□ -0.88
VPS45-210ENST00000497638 USP26Q9BXU7 913 aa9.53□□□□□ -0.88
VPS45-210ENST00000497638 FOXD3Q9UJU5 478 aaPredicted RBP9.53□□□□□ -0.88
VPS45-210ENST00000497638 OGDHLQ9ULD0 1010 aa9.53□□□□□ -0.88
VPS45-210ENST00000497638 NCOR1O75376 2440 aa9.53□□□□□ -0.88
VPS45-210ENST00000497638 GP2P55259 537 aaKnown RBP9.52□□□□□ -0.89
VPS45-210ENST00000497638 CAVIN4Q5BKX8 364 aa9.52□□□□□ -0.89
VPS45-210ENST00000497638 GADL1Q6ZQY3 521 aa9.52□□□□□ -0.89
VPS45-210ENST00000497638 SCYL3Q8IZE3 742 aa9.52□□□□□ -0.89
VPS45-210ENST00000497638 MAFAQ8NHW3 353 aaPredicted RBP9.52□□□□□ -0.89
VPS45-210ENST00000497638 PICK1Q9NRD5 415 aa9.52□□□□□ -0.89
VPS45-210ENST00000497638 PFASO15067 1338 aa9.52□□□□□ -0.89
VPS45-210ENST00000497638 MROH5Q6ZUA9 1318 aa9.52□□□□□ -0.89
VPS45-210ENST00000497638 MEGF11A6BM72 1044 aa9.51□□□□□ -0.89
VPS45-210ENST00000497638 PRR19A6NJB7 356 aa9.51□□□□□ -0.89
VPS45-210ENST00000497638 APAF1O14727 1248 aa9.51□□□□□ -0.89
VPS45-210ENST00000497638 ABL1P00519 1130 aa9.51□□□□□ -0.89
VPS45-210ENST00000497638 VN1R5Q7Z5H4 357 aa9.51□□□□□ -0.89
VPS45-210ENST00000497638 ANKRD13CQ8N6S4 541 aa9.51□□□□□ -0.89
VPS45-210ENST00000497638 CYP4F12Q9HCS2 524 aa9.51□□□□□ -0.89
VPS45-210ENST00000497638 AGTPBP1Q9UPW5 1226 aa9.51□□□□□ -0.89
VPS45-210ENST00000497638 ZHX2Q9Y6X8 837 aa9.51□□□□□ -0.89
VPS45-210ENST00000497638 MUC3AQ02505 3323 aa9.51□□□□□ -0.89
VPS45-210ENST00000497638 DOCK2Q92608 1830 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 WDR64B1ANS9 1081 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 PAX4O43316 350 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 COL6A1P12109 1028 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 NPR3P17342 541 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 MAP4P27816 1152 aaKnown RBP9.5□□□□□ -0.89
VPS45-210ENST00000497638 GCLCP48506 637 aaPredicted RBP9.5□□□□□ -0.89
VPS45-210ENST00000497638 TCP10Q12799 353 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 TWISTNBQ3B726 338 aaPredicted RBP9.5□□□□□ -0.89
VPS45-210ENST00000497638 EPHA10Q5JZY3 1008 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 GIMAP7Q8NHV1 300 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 MFSD14AQ96MC6 490 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 FAM161BQ96MY7 647 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 AFG3L2Q9Y4W6 797 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 OAS3Q9Y6K5 1087 aaKnown RBP9.5□□□□□ -0.89
VPS45-210ENST00000497638 KIF16BQ96L93 1317 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 ATRNL1Q5VV63 1379 aa9.5□□□□□ -0.89
VPS45-210ENST00000497638 DOCK1Q14185 1865 aa9.49□□□□□ -0.89
VPS45-210ENST00000497638 GRM8O00222 908 aa9.49□□□□□ -0.89
VPS45-210ENST00000497638 SGO2Q562F6 1265 aa9.49□□□□□ -0.89
VPS45-210ENST00000497638 MAP3K21Q5TCX8 1036 aa9.49□□□□□ -0.89
VPS45-210ENST00000497638 CDC42EP5Q6NZY7 148 aa9.49□□□□□ -0.89
VPS45-210ENST00000497638 CDX2Q99626 313 aaPredicted RBP9.49□□□□□ -0.89
VPS45-210ENST00000497638 LBHD1Q9BQE6 289 aaPredicted RBP9.49□□□□□ -0.89
VPS45-210ENST00000497638 ANO2Q9NQ90 1003 aa9.49□□□□□ -0.89
VPS45-210ENST00000497638 DAGLAQ9Y4D2 1042 aa9.49□□□□□ -0.89
VPS45-210ENST00000497638 PHIPQ8WWQ0 1821 aa9.48□□□□□ -0.89
VPS45-210ENST00000497638 GSTM4Q03013 218 aa9.48□□□□□ -0.89
VPS45-210ENST00000497638 LRRC26Q2I0M4 334 aa9.48□□□□□ -0.89
VPS45-210ENST00000497638 BEND3Q5T5X7 828 aa9.48□□□□□ -0.89
VPS45-210ENST00000497638 WDR66Q8TBY9 1149 aa9.48□□□□□ -0.89
VPS45-210ENST00000497638 TRIB2Q92519 343 aa9.48□□□□□ -0.89
VPS45-210ENST00000497638 TSR2Q969E8 191 aaKnown RBP9.48□□□□□ -0.89
VPS45-210ENST00000497638 PUS3Q9BZE2 481 aaKnown RBP9.48□□□□□ -0.89
VPS45-210ENST00000497638 LATS2Q9NRM7 1088 aa9.48□□□□□ -0.89
VPS45-210ENST00000497638 GJD2Q9UKL4 321 aa9.48□□□□□ -0.89
VPS45-210ENST00000497638 LRRFIP2Q9Y608 721 aaKnown RBP9.48□□□□□ -0.89
VPS45-210ENST00000497638 MYH13Q9UKX3 1938 aa9.48□□□□□ -0.89
VPS45-210ENST00000497638 DNAH12Q6ZR08 3092 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 CDH23Q9H251 3354 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 TRIM75PA6NK02 468 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 FZD6O60353 706 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 CTNND1O60716 968 aaKnown RBP9.47□□□□□ -0.89
VPS45-210ENST00000497638 ENTPD3O75355 529 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 XRCC5P13010 732 aaKnown RBP9.47□□□□□ -0.89
VPS45-210ENST00000497638 SPINK2P20155 84 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 ZEB1P37275 1124 aaPredicted RBP9.47□□□□□ -0.89
VPS45-210ENST00000497638 PABPC4Q13310 644 aaKnown RBP eCLIP9.47□□□□□ -0.89
VPS45-210ENST00000497638 METTL24Q5JXM2 366 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 FBXL6Q8N531 539 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 VGLL2Q8N8G2 317 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 SOCS4Q8WXH5 440 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 TMPRSS13Q9BYE2 586 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 BHLHE41Q9C0J9 482 aaPredicted RBP9.47□□□□□ -0.89
VPS45-210ENST00000497638 SOX17Q9H6I2 414 aaPredicted RBP9.47□□□□□ -0.89
VPS45-210ENST00000497638 C9orf78Q9NZ63 289 aaPredicted RBP9.47□□□□□ -0.89
VPS45-210ENST00000497638 GTF3C3Q9Y5Q9 886 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 LOC285556D6RIA3 1793 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 MAST2Q6P0Q8 1798 aa9.47□□□□□ -0.89
VPS45-210ENST00000497638 LOC100289279A0A1B0GTE1 492 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 CARNS1A5YM72 827 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 PDE8BO95263 885 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 WNT11O96014 354 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 IFIT1P09914 478 aaKnown RBP9.46□□□□□ -0.9
VPS45-210ENST00000497638 ESRRAP11474 423 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms