RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	ESR2	Q92731	530 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	MRRF	Q96E11	262 aa	Known RBP	11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	STRBP	Q96SI9	672 aa	Known RBP	11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	STRC	Q7RTU9	1775 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ANKAR	Q7Z5J8	1434 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	BICDL2	A1A5D9	508 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SPDYE3	A6NKU9	549 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	NUGGC	Q68CJ6	796 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	VSIG1	Q86XK7	387 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	UBA5	Q9GZZ9	404 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SLC52A2	Q9HAB3	445 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SH3BP1	Q9Y3L3	701 aa		11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CHD2	O14647	1828 aa	Known RBP	11.63	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	LMTK3	Q96Q04	1460 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	KAT6B	Q8WYB5	2073 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	LRRC10B	A6NIK2	292 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	NMT2	O60551	498 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PYGL	P06737	847 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ITGA4	P13612	1032 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	LIFR	P42702	1097 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	RWDD2B	P57060	319 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	USP4	Q13107	963 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SFMBT2	Q5VUG0	894 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PEX26	Q7Z412	305 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	FBF1	Q8TES7	1133 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	NSRP1	Q9H0G5	558 aa	Known RBP	11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	JAG2	Q9Y219	1238 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SNX24	Q9Y343	169 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	hCG_2014768	A0A024R1R8	64 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597		A0A1W2PQC6	194 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	GC	P02774	474 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ABCB4	P21439	1286 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ZNF449	Q6P9G9	518 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TRPM8	Q7Z2W7	1104 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	RPUSD2	Q8IZ73	545 aa	Known RBP	11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TRIM4	Q9C037	500 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PDS5A	Q29RF7	1337 aa	Known RBP	11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	RFX7	Q2KHR2	1363 aa		11.62	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ITGA6	P23229	1130 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	RNASEL	Q05823	741 aa	Known RBP	11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	DENND2C	Q68D51	928 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SH3RF1	Q7Z6J0	888 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SGMS1	Q86VZ5	419 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CEP120	Q8N960	986 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	NEUROG2	Q9H2A3	272 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	THAP9	Q9H5L6	903 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	DISC1	Q9NRI5	854 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	DBR1	Q9UK59	544 aa	Known RBP	11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	UTP11	Q9Y3A2	253 aa	Known RBP	11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PLCG1	P19174	1290 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CCNE1	P24864	410 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	RCSD1	Q6JBY9	416 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	LMNTD2	Q8IXW0	634 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	STAG2	Q8N3U4	1231 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TATDN2	Q93075	761 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	FGFR1OP2	Q9NVK5	253 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	MYH15	Q9Y2K3	1946 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	OVOS2	A0A0G2JMS6	1433 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597		A0A1B0GVG6	124 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	KCNA6	P17658	529 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TEC	P42680	631 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TXK	P42681	527 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CACNB1	Q02641	598 aa	Predicted RBP	11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ZNF211	Q13398	564 aa	Predicted RBP	11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PDXDC2P	Q6P474	469 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	C6orf89	Q6UWU4	347 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CABP7	Q86V35	215 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	C3orf20	Q8ND61	904 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CCDC26	Q8TAB7	109 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	CPVL	Q9H3G5	476 aa		11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	RNF41	Q9H4P4	317 aa	Predicted RBP	11.61	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	FAM208A	Q9UK61	1670 aa	Known RBP	11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	KRT18	P05783	430 aa	Known RBP	11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	RAD23B	P54727	409 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	NUCKS1	Q9H1E3	243 aa	Known RBP	11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	GREM2	Q9H772	168 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ARHGEF10L	Q9HCE6	1279 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TBK1	Q9UHD2	729 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	RAD21	O60216	631 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	SLC8A3	P57103	927 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	IFI35	P80217	286 aa	Predicted RBP	11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ADCY2	Q08462	1091 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	VWA3B	Q502W6	1294 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TMTC2	Q8N394	836 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ZNF507	Q8TCN5	953 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ZNF570	Q96NI8	536 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TMEM60	Q9H2L4	133 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PIDD1	Q9HB75	910 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PAPOLB	Q9NRJ5	636 aa	Known RBP	11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	PNMA3	Q9UL41	463 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	USH1C	Q9Y6N9	552 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	ATP2A2	P16615	1042 aa	Known RBP	11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	DRD4	P21917	467 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	GRIK3	Q13003	919 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	XRCC4	Q13426	336 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	MUM1	Q2TAK8	710 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TTI2	Q6NXR4	508 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TLDC1	Q6P9B6	456 aa		11.6	□□□□□ -0.55
TRAPPC12-223	ENST00000497597	TEKT4	Q8WW24	435 aa		11.6	□□□□□ -0.55

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