RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 AMACRQ9UHK6 382 aa14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 FER1L4A9Z1Z3 1794 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 NEFHP12036 1026 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 PHKG2P15735 406 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 BIRC3Q13489 604 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 KIAA0753Q2KHM9 967 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 MREGQ8N565 214 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 P2RX5Q93086 422 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 STRBPQ96SI9 672 aaKnown RBP14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 ARHGEF10LQ9HCE6 1279 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 MLXIPLQ9NP71 852 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 PLAGL2Q9UPG8 496 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 IFIT5Q13325 482 aaKnown RBP14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 ANKLE2Q86XL3 938 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 CELF4Q9BZC1 486 aaKnown RBP14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 ECT2Q9H8V3 914 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 TNKSO95271 1327 aa14.33□□□□□ -0.12
GAPVD1-220ENST00000497580 PECAM1P16284 738 aaPredicted RBP14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 PHKA1P46020 1223 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 KSR1Q8IVT5 923 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 FAM114A1Q8IWE2 563 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 PACSIN1Q9BY11 444 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 CNNM2Q9H8M5 875 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 SHBGP04278 402 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 KIF5BP33176 963 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 STK4Q13043 487 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 PRPF4BQ13523 1007 aaKnown RBP14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 LRRC14Q15048 493 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 TRPM8Q7Z2W7 1104 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 ZNF572Q7Z3I7 529 aaPredicted RBP14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 SLC17A8Q8NDX2 589 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 PRMT1Q99873 361 aaKnown RBP14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 TRIM33Q9UPN9 1127 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 TECPR2O15040 1411 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 CYP27B1O15528 508 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 RAPGEF1Q13905 1077 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 RPS6KA1Q15418 735 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 ARMC9Q7Z3E5 817 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 TBC1D5Q92609 795 aa14.32□□□□□ -0.12
GAPVD1-220ENST00000497580 ADAMTS3O15072 1205 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 ITGA6P23229 1130 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 CCDC38Q502W7 563 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 MTFR1LQ9H019 292 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 DISC1Q9NRI5 854 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 ABCF2Q9UG63 623 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 HEG1Q9ULI3 1381 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 NBPF26B4DH59 902 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 NQO1P15559 274 aaKnown RBP14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 GRIPAP1Q4V328 841 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 ANKRD20A2Q5SQ80 823 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 ANKRD20A1Q5TYW2 823 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 ANKRD20A3Q5VUR7 823 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 NBPF10Q6P3W6 841 aaKnown RBP14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 NBPF15Q8N660 670 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 LBHD1Q9BQE6 289 aaPredicted RBP14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 PHF20Q9BVI0 1012 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 ISCUQ9H1K1 167 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 INTS9Q9NV88 658 aaKnown RBP14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 TSKSQ9UJT2 592 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 KRIT1O00522 736 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 SART1O43290 800 aaKnown RBP14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 GHRP10912 638 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 RANBP1P43487 201 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 RPS6KA3P51812 740 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 ICA1Q05084 483 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 PKN1Q16512 942 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 MIIPQ5JXC2 388 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 LRIG3Q6UXM1 1119 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 STAG2Q8N3U4 1231 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 ACSBG1Q96GR2 724 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 RNF26Q9BY78 433 aaPredicted RBP14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 NACAP1Q9BZK3 213 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 NDST4Q9H3R1 872 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 ADAMTS1Q9UHI8 967 aa14.31□□□□□ -0.12
GAPVD1-220ENST00000497580 VEGFAP15692 232 aaPredicted RBP14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 LACTBP83111 547 aaPredicted RBP14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 USP38Q8NB14 1042 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 ZFATQ9P243 1243 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 NALCNQ8IZF0 1738 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 NWD2Q9ULI1 1742 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 BICDL2A1A5D9 508 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 TTI1O43156 1089 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 LINGO3P0C6S8 592 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 CCNE1P24864 410 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 RAB27AP51159 221 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 IFIT1BQ5T764 474 aaKnown RBP14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 DTHD1Q6ZMT9 781 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 SDR42E1Q8WUS8 393 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 PAPOLBQ9NRJ5 636 aaKnown RBP14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 SOS2Q07890 1332 aaPredicted RBP14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 C5orf60A6NFR6 353 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 H0Y3Z8 333 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 TULP1O00294 542 aaPredicted RBP14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 ITGA4P13612 1032 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 ATP2A2P16615 1042 aaKnown RBP14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 ATP11AP98196 1134 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 CATIPQ7Z7H3 387 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 CCHCR1Q8TD31 782 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms