RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 PLCD4Q9BRC7 762 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 NOC4LQ9BVI4 516 aaKnown RBP14.26□□□□□ -0.13
VEGFA-215ENST00000497139 SETD1BQ9UPS6 1966 aaKnown RBP14.25□□□□□ -0.13
VEGFA-215ENST00000497139 CTNND1O60716 968 aaKnown RBP14.25□□□□□ -0.13
VEGFA-215ENST00000497139 PLEKP08567 350 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-215ENST00000497139 CNGA1P29973 690 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 MTIF2P46199 727 aaKnown RBP14.25□□□□□ -0.13
VEGFA-215ENST00000497139 PMS1P54277 932 aaKnown RBP14.25□□□□□ -0.13
VEGFA-215ENST00000497139 ERVK-9P63128 1117 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 LBRQ14739 615 aaKnown RBP14.25□□□□□ -0.13
VEGFA-215ENST00000497139 SGSM1Q2NKQ1 1148 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 ANKRD20A2Q5SQ80 823 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 THEMIS2Q5TEJ8 643 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 ANKRD20A1Q5TYW2 823 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 ANKRD20A3Q5VUR7 823 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 TMED8Q6PL24 325 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-215ENST00000497139 TNFRSF25Q93038 417 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 DUSP9Q99956 384 aaKnown RBP14.25□□□□□ -0.13
VEGFA-215ENST00000497139 IRAK4Q9NWZ3 460 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 CTNNAL1Q9UBT7 734 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 SCN11AQ9UI33 1791 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 RTL9Q8NET4 1388 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 CCDC57Q2TAC2 916 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 COBLL1Q53SF7 1204 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 RPUSD2Q8IZ73 545 aaKnown RBP14.25□□□□□ -0.13
VEGFA-215ENST00000497139 NUP133Q8WUM0 1156 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 LPIN2Q92539 896 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 PBKQ96KB5 322 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 OSBPL1AQ9BXW6 950 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 MAGEF1Q9HAY2 307 aa14.25□□□□□ -0.13
VEGFA-215ENST00000497139 STAT6P42226 847 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 KLK7P49862 253 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 LACTBP83111 547 aaPredicted RBP14.24□□□□□ -0.13
VEGFA-215ENST00000497139 NAB2Q15742 525 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 AKNAD1Q5T1N1 836 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 P2RX5Q93086 422 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 RGL1Q9NZL6 768 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 SALL4Q9UJQ4 1053 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 MAPK8IP1Q9UQF2 711 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 SIK3Q9Y2K2 1263 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 LRRD1A4D1F6 860 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 CCDC188H7C350 402 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 SART1O43290 800 aaKnown RBP14.24□□□□□ -0.13
VEGFA-215ENST00000497139 CTCFP49711 727 aaPredicted RBP14.24□□□□□ -0.13
VEGFA-215ENST00000497139 NCALDP61601 193 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 ATP11AP98196 1134 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 KRT71Q3SY84 523 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 SDCCAG8Q86SQ7 713 aaPredicted RBP14.24□□□□□ -0.13
VEGFA-215ENST00000497139 UBLCP1Q8WVY7 318 aaPredicted RBP14.24□□□□□ -0.13
VEGFA-215ENST00000497139 DTNBP1Q96EV8 351 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 NAF1Q96HR8 494 aaKnown RBP14.24□□□□□ -0.13
VEGFA-215ENST00000497139 RAB17Q9H0T7 212 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 FBXL5Q9UKA1 691 aa14.24□□□□□ -0.13
VEGFA-215ENST00000497139 FAM205CA6NFA0 338 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 PRPF3O43395 683 aaKnown RBP14.23□□□□□ -0.13
VEGFA-215ENST00000497139 SNRPA1P09661 255 aaKnown RBP14.23□□□□□ -0.13
VEGFA-215ENST00000497139 ALDH5A1P51649 535 aaPredicted RBP14.23□□□□□ -0.13
VEGFA-215ENST00000497139 GALNTL6Q49A17 601 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 TMC3Q7Z5M5 1100 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 LMNTD2Q8IXW0 634 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 OR2W6PQ8NHA6 318 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 ACTRT1Q8TDG2 376 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 SCFD2Q8WU76 684 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 SEC14L1Q92503 715 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 TAF4BQ92750 862 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 SYN2Q92777 582 aaPredicted RBP14.23□□□□□ -0.13
VEGFA-215ENST00000497139 PGM2Q96G03 612 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 MYH7BA7E2Y1 1941 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 F8VZ95 297 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 ATP5J2-PTCD1G3V325 749 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 PDLIM1O00151 329 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 KLRC4O43908 158 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 PTCD1O75127 700 aaKnown RBP14.23□□□□□ -0.13
VEGFA-215ENST00000497139 MMEP08473 750 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 MMP13P45452 471 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 PDIA5Q14554 519 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 ZNF174Q15697 407 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 APBB1IPQ7Z5R6 666 aaPredicted RBP14.23□□□□□ -0.13
VEGFA-215ENST00000497139 ZNF654Q8IZM8 581 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 CUEDC2Q9H467 287 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 DISC1Q9NRI5 854 aa14.23□□□□□ -0.13
VEGFA-215ENST00000497139 AKAP11Q9UKA4 1901 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 BTNL10A8MVZ5 291 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 RARAP10276 462 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 ABL2P42684 1182 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 TAF11Q15544 211 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 MFSD6Q6ZSS7 791 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 STAG2Q8N3U4 1231 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 ATXN2LQ8WWM7 1075 aaKnown RBP14.22□□□□□ -0.13
VEGFA-215ENST00000497139 SLITRK6Q9H5Y7 841 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 ARHGEF3Q9NR81 526 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 FAM114A2Q9NRY5 505 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 LRRC42Q9Y546 428 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 NUP188Q5SRE5 1749 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 GPR75-ASB3A0A0A6YYF3 556 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 SMIM24O75264 130 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 PALMO75781 387 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 HOXA7P31268 230 aaPredicted RBP14.22□□□□□ -0.13
VEGFA-215ENST00000497139 SKIV2L2P42285 1042 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms