RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 ADD1P35611 737 aaKnown RBP8.69□□□□□ -1.02
CDHR3-214ENST00000496633 CDK7P50613 346 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 PURAQ00577 322 aaKnown RBP8.69□□□□□ -1.02
CDHR3-214ENST00000496633 TLE2Q04725 743 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 FUT2Q10981 343 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 METTL7BQ6UX53 244 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 CXCL17Q6UXB2 119 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 NIPA1Q7RTP0 329 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 REXO1Q8N1G1 1221 aaKnown RBP8.69□□□□□ -1.02
CDHR3-214ENST00000496633 TMEM199Q8N511 208 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 SLC43A3Q8NBI5 491 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
CDHR3-214ENST00000496633 GDF15Q99988 308 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 ZMYND12Q9H0C1 365 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 ZNF215Q9UL58 517 aaPredicted RBP8.69□□□□□ -1.02
CDHR3-214ENST00000496633 PCDHA6Q9UN73 950 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 PCDHA8Q9Y5H6 950 aa8.69□□□□□ -1.02
CDHR3-214ENST00000496633 STXBP3O00186 592 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 CTAGE5O15320 804 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 ADCY6O43306 1168 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 PFKMP08237 780 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 MYL3P08590 195 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 CDC27P30260 824 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 ZNF76P36508 570 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 SETQ01105 290 aaPredicted RBP8.68□□□□□ -1.02
CDHR3-214ENST00000496633 ARHGAP1Q07960 439 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 PPIGQ13427 754 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDHR3-214ENST00000496633 BFSP2Q13515 415 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 MTMR1Q13613 665 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 SLC35G1Q2M3R5 365 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 CELF3Q5SZQ8 465 aaKnown RBP8.68□□□□□ -1.02
CDHR3-214ENST00000496633 MYSM1Q5VVJ2 828 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 WWC2Q6AWC2 1192 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 GPR153Q6NV75 609 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 USP17L6PQ6QN14 398 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 CHRDL2Q6WN34 429 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 FAM43BQ6ZT52 329 aaPredicted RBP8.68□□□□□ -1.02
CDHR3-214ENST00000496633 SESTD1Q86VW0 696 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 RPUSD2Q8IZ73 545 aaKnown RBP8.68□□□□□ -1.02
CDHR3-214ENST00000496633 TDHQ8IZJ6 230 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 CMTR1Q8N1G2 835 aaKnown RBP8.68□□□□□ -1.02
CDHR3-214ENST00000496633 SPATA33Q96N06 139 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 NAP1L4Q99733 375 aaKnown RBP8.68□□□□□ -1.02
CDHR3-214ENST00000496633 SDF4Q9BRK5 362 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 SLC26A6Q9BXS9 759 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 UPF3BQ9BZI7 483 aaKnown RBP8.68□□□□□ -1.02
CDHR3-214ENST00000496633 UBE2OQ9C0C9 1292 aaKnown RBP8.68□□□□□ -1.02
CDHR3-214ENST00000496633 BRMS1Q9HCU9 246 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 PRDM5Q9NQX1 630 aaPredicted RBP8.68□□□□□ -1.02
CDHR3-214ENST00000496633 FAM217BQ9NTX9 383 aaPredicted RBP8.68□□□□□ -1.02
CDHR3-214ENST00000496633 NOD1Q9Y239 953 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 KIF3AQ9Y496 699 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 STK36Q9NRP7 1315 aa8.68□□□□□ -1.02
CDHR3-214ENST00000496633 MYADML2A6NDP7 307 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 PITPNM1O00562 1244 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 GTPBP6O43824 516 aaPredicted RBP8.67□□□□□ -1.02
CDHR3-214ENST00000496633 PFKFB2O60825 505 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 NFASCO94856 1347 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 GGPS1O95749 300 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 TIMP1P01033 207 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 MMP3P08254 477 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 HOXD8P13378 290 aaPredicted RBP8.67□□□□□ -1.02
CDHR3-214ENST00000496633 RFC2P35250 354 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 SREBF1P36956 1147 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 USP11P51784 963 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 NEK4P51957 841 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 MRPS9P82933 396 aaKnown RBP8.67□□□□□ -1.02
CDHR3-214ENST00000496633 BEX3Q00994 111 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 FAAP100Q0VG06 881 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 TOB2Q14106 344 aaPredicted RBP8.67□□□□□ -1.02
CDHR3-214ENST00000496633 NTRK3Q16288 839 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 LY6KQ17RY6 165 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 HABP4Q5JVS0 413 aaKnown RBP8.67□□□□□ -1.02
CDHR3-214ENST00000496633 FAM126BQ8IXS8 530 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 PLCD3Q8N3E9 789 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 C7orf31Q8N865 590 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 CAGE1Q8TC20 777 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 AFG1LQ8WV93 481 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 GPKOWQ92917 476 aaPredicted RBP eCLIP8.67□□□□□ -1.02
CDHR3-214ENST00000496633 LENG1Q96BZ8 264 aaPredicted RBP8.67□□□□□ -1.02
CDHR3-214ENST00000496633 ZSCAN31Q96LW9 406 aaPredicted RBP8.67□□□□□ -1.02
CDHR3-214ENST00000496633 JADE2Q9NQC1 790 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 PDLIM7Q9NR12 457 aa8.67□□□□□ -1.02
CDHR3-214ENST00000496633 ZMYND8Q9ULU4 1186 aaPredicted RBP8.67□□□□□ -1.02
CDHR3-214ENST00000496633 COLQQ9Y215 455 aaPredicted RBP8.67□□□□□ -1.02
CDHR3-214ENST00000496633 ALPK3Q96L96 1907 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 ST18O60284 1047 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 ARIH2O95376 493 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 F2P00734 622 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 CD4P01730 458 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 CYP3A4P08684 503 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 CPA1P15085 419 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 SYN1P17600 705 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 UBA1P22314 1058 aaKnown RBP8.66□□□□□ -1.02
CDHR3-214ENST00000496633 MAGEA10P43363 369 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-214ENST00000496633 MCM2P49736 904 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 CLK2P49760 499 aaKnown RBP8.66□□□□□ -1.02
CDHR3-214ENST00000496633 SLC26A2P50443 739 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 NLRP5P59047 1200 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 CCT2P78371 535 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms