RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 PRMT6Q96LA8 375 aaPredicted RBP16.59■□□□□ 0.25
UBXN11-216ENST00000496466 LRRC27Q9C0I9 530 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 NDST4Q9H3R1 872 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 ABCB6Q9NP58 842 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 ERLIN1O75477 346 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 SLC1A4P43007 532 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 MRPL12P52815 198 aaKnown RBP16.59■□□□□ 0.25
UBXN11-216ENST00000496466 VSNL1P62760 191 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 PSMD2Q13200 908 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 SLFN13Q68D06 897 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 EHBP1Q8NDI1 1231 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 ZCCHC17Q9NP64 241 aaKnown RBP16.59■□□□□ 0.25
UBXN11-216ENST00000496466 NYAP2Q9P242 653 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 ABCB11O95342 1321 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 IPO7O95373 1038 aaKnown RBP16.58■□□□□ 0.25
UBXN11-216ENST00000496466 FGFR1OPO95684 399 aaKnown RBP16.58■□□□□ 0.25
UBXN11-216ENST00000496466 HNRNPH3P31942 346 aaKnown RBP16.58■□□□□ 0.25
UBXN11-216ENST00000496466 JAG1P78504 1218 aa16.58■□□□□ 0.25
UBXN11-216ENST00000496466 LRRC63Q05C16 580 aa16.58■□□□□ 0.25
UBXN11-216ENST00000496466 MAN2A1Q16706 1144 aa16.58■□□□□ 0.25
UBXN11-216ENST00000496466 QRICH1Q2TAL8 776 aa16.58■□□□□ 0.25
UBXN11-216ENST00000496466 GJA10Q969M2 543 aa16.58■□□□□ 0.25
UBXN11-216ENST00000496466 PSTPIP2Q9H939 334 aa16.58■□□□□ 0.25
UBXN11-216ENST00000496466 SAR1BQ9Y6B6 198 aa16.58■□□□□ 0.25
UBXN11-216ENST00000496466 MYH7BA7E2Y1 1941 aa16.58■□□□□ 0.24
UBXN11-216ENST00000496466 EPHB6O15197 1021 aa16.58■□□□□ 0.24
UBXN11-216ENST00000496466 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
UBXN11-216ENST00000496466 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
UBXN11-216ENST00000496466 CYP27A1Q02318 531 aa16.58■□□□□ 0.24
UBXN11-216ENST00000496466 ICA1Q05084 483 aa16.58■□□□□ 0.24
UBXN11-216ENST00000496466 LRRC41Q15345 812 aa16.58■□□□□ 0.24
UBXN11-216ENST00000496466 GLIS3Q8NEA6 775 aa16.58■□□□□ 0.24
UBXN11-216ENST00000496466 PURBQ96QR8 312 aaKnown RBP16.58■□□□□ 0.24
UBXN11-216ENST00000496466 L1RE1Q9UN81 338 aa16.58■□□□□ 0.24
UBXN11-216ENST00000496466 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
UBXN11-216ENST00000496466 ZNF263O14978 683 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 CYP2C19P33261 490 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 PDE4CQ08493 712 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 LRRC55Q6ZSA7 311 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 HDXQ7Z353 690 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 DCAF4Q8WV16 495 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 DNAJC19Q96DA6 116 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 TMEM51Q9NW97 253 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.57■□□□□ 0.24
UBXN11-216ENST00000496466 PLAGL2Q9UPG8 496 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 DUSP10Q9Y6W6 482 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 SRGAP2O75044 1071 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 PLEKP08567 350 aaPredicted RBP16.57■□□□□ 0.24
UBXN11-216ENST00000496466 GCFC2P16383 781 aaKnown RBP16.57■□□□□ 0.24
UBXN11-216ENST00000496466 VAV2P52735 878 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 SNAP25P60880 206 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 ABCB5Q2M3G0 1257 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 CCDC42Q96M95 316 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 MMS19Q96T76 1030 aa16.57■□□□□ 0.24
UBXN11-216ENST00000496466 FAM207AQ9NSI2 230 aaPredicted RBP16.57■□□□□ 0.24
UBXN11-216ENST00000496466 USP17L15C9J2P7 530 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 USP17L13C9JLJ4 530 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 USP17L11C9JVI0 530 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 USP17L18D6R9N7 530 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 USP17L22D6RA61 530 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 USP17L17D6RBQ6 530 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 USP17L19D6RCP7 530 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 USP17L20D6RJB6 530 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 MARCH6O60337 910 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 TUBBP07437 444 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 USP17L24Q0WX57 530 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 RRP1BQ14684 758 aaKnown RBP16.56■□□□□ 0.24
UBXN11-216ENST00000496466 FOXR2Q6PJQ5 311 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 USP17L6PQ6QN14 398 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 TMEM179Q6ZVK1 233 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 SUPT20HQ8NEM7 779 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 TSG101Q99816 390 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 GBP3Q9H0R5 595 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 ARHGAP20Q9P2F6 1191 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 RGS17Q9UGC6 210 aaPredicted RBP16.56■□□□□ 0.24
UBXN11-216ENST00000496466 PCDHA1Q9Y5I3 950 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 RGPD3A6NKT7 1758 aaPredicted RBP16.56■□□□□ 0.24
UBXN11-216ENST00000496466 RGPD4Q7Z3J3 1758 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 F5H6K3 240 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 H3BQF6 201 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 KLRC3Q07444 240 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 KIF5AQ12840 1032 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 COASYQ13057 564 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 CDC37Q16543 378 aaPredicted RBP16.56■□□□□ 0.24
UBXN11-216ENST00000496466 HYIQ5T013 277 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 WDR93Q6P2C0 686 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 POTEAQ6S8J7 498 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 KRT26Q7Z3Y9 468 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 MMRN2Q9H8L6 949 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 SUGCTQ9HAC7 445 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 PCDHA12Q9UN75 941 aa16.56■□□□□ 0.24
UBXN11-216ENST00000496466 ARFGEF1Q9Y6D6 1849 aa16.55■□□□□ 0.24
UBXN11-216ENST00000496466 ENTPD3O75355 529 aa16.55■□□□□ 0.24
UBXN11-216ENST00000496466 GH2P01242 217 aa16.55■□□□□ 0.24
UBXN11-216ENST00000496466 USP14P54578 494 aa16.55■□□□□ 0.24
UBXN11-216ENST00000496466 SPA17Q15506 151 aa16.55■□□□□ 0.24
UBXN11-216ENST00000496466 CC2D2BQ6DHV5 1058 aa16.55■□□□□ 0.24
UBXN11-216ENST00000496466 CCDC84Q86UT8 332 aaPredicted RBP16.55■□□□□ 0.24
UBXN11-216ENST00000496466 MYOCDQ8IZQ8 938 aa16.55■□□□□ 0.24
UBXN11-216ENST00000496466 UIMC1Q96RL1 719 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms