RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 COASYQ13057 564 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 GPATCH4Q5T3I0 446 aaKnown RBP12.81□□□□□ -0.36
CDCA7-208ENST00000496441 P2RX7Q99572 595 aaKnown RBP12.81□□□□□ -0.36
CDCA7-208ENST00000496441 GTPBP4Q9BZE4 634 aaKnown RBP12.81□□□□□ -0.36
CDCA7-208ENST00000496441 MLXIPQ9HAP2 919 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 LRRC53A6NM62 1247 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 SFI1A8K8P3 1242 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 CHMP2AO43633 222 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 OAS2P29728 719 aaKnown RBP12.81□□□□□ -0.36
CDCA7-208ENST00000496441 CYLC1P35663 651 aaPredicted RBP12.81□□□□□ -0.36
CDCA7-208ENST00000496441 PDE6BP35913 854 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 VSNL1P62760 191 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 ZBED6P86452 979 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 CENPPQ6IPU0 288 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 TMC4Q7Z404 712 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 MASTLQ96GX5 879 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 MMS19Q96T76 1030 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 ANO3Q9BYT9 981 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 MAGEF1Q9HAY2 307 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 ABCB6Q9NP58 842 aa12.81□□□□□ -0.36
CDCA7-208ENST00000496441 ZNF263O14978 683 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 KRT86O43790 486 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 SMARCA1P28370 1054 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 EIF4A3P38919 411 aaKnown RBP12.8□□□□□ -0.36
CDCA7-208ENST00000496441 SMC1AQ14683 1233 aaKnown RBP12.8□□□□□ -0.36
CDCA7-208ENST00000496441 SPA17Q15506 151 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 KCTD19Q17RG1 926 aaPredicted RBP12.8□□□□□ -0.36
CDCA7-208ENST00000496441 MYOCDQ8IZQ8 938 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 BMP2KQ9NSY1 1161 aaPredicted RBP12.8□□□□□ -0.36
CDCA7-208ENST00000496441 SMARCAL1Q9NZC9 954 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 STK17AQ9UEE5 414 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 KLRG2A4D1S0 409 aaPredicted RBP12.8□□□□□ -0.36
CDCA7-208ENST00000496441 MED24O75448 989 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 PTPROQ16827 1216 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 FAM26FQ5R3K3 315 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
CDCA7-208ENST00000496441 DNAAF5Q86Y56 855 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 GSPT2Q8IYD1 628 aaKnown RBP12.8□□□□□ -0.36
CDCA7-208ENST00000496441 NOC3LQ8WTT2 800 aaKnown RBP12.8□□□□□ -0.36
CDCA7-208ENST00000496441 TTYH3Q9C0H2 523 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 HAUS4Q9H6D7 363 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 PI4KBQ9UBF8 816 aa12.8□□□□□ -0.36
CDCA7-208ENST00000496441 BUB1O43683 1085 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 PLA2G4BP0C869 781 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 ZNF76P36508 570 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 ECE1P42892 770 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 NOVP48745 357 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 KRT83P78385 493 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 GFPT1Q06210 699 aaPredicted RBP12.79□□□□□ -0.36
CDCA7-208ENST00000496441 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 ABCB5Q2M3G0 1257 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 HHIPL2Q6UWX4 724 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 PRMT6Q96LA8 375 aaPredicted RBP12.79□□□□□ -0.36
CDCA7-208ENST00000496441 CSRNP1Q96S65 589 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 IFIH1Q9BYX4 1025 aaKnown RBP12.79□□□□□ -0.36
CDCA7-208ENST00000496441 ARHGAP20Q9P2F6 1191 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 SAR1BQ9Y6B6 198 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 MOCS3O95396 460 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 FECHP22830 423 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 NT5C2P49902 561 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 PDIA5Q14554 519 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 CCDC174Q6PII3 467 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 SIAH1Q8IUQ4 282 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 TBC1D5Q92609 795 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 TSG101Q99816 390 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 FUT8Q9BYC5 575 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 IKZF4Q9H2S9 585 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 EHD2Q9NZN4 543 aa12.79□□□□□ -0.36
CDCA7-208ENST00000496441 SPDYE3A6NKU9 549 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 H0YIN7 160 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 N4BP1O75113 896 aaKnown RBP12.78□□□□□ -0.36
CDCA7-208ENST00000496441 CFBP00751 764 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 CLK2P49760 499 aaKnown RBP12.78□□□□□ -0.36
CDCA7-208ENST00000496441 CASP5P51878 434 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 RRP1BQ14684 758 aaKnown RBP12.78□□□□□ -0.36
CDCA7-208ENST00000496441 PPP4R3AQ6IN85 833 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 DNAJC19Q96DA6 116 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 CAPN6Q9Y6Q1 641 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 C21orf2O43822 256 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 RAD17O75943 681 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 NDUFB10O96000 172 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 EPS15P42566 896 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 ARHGAP4P98171 946 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 MAN2A1Q16706 1144 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 MIGA2Q7L4E1 593 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 PODNQ7Z5L7 613 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 GUF1Q8N442 669 aaKnown RBP12.78□□□□□ -0.36
CDCA7-208ENST00000496441 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDCA7-208ENST00000496441 NUP58Q9BVL2 599 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 PDE11AQ9HCR9 933 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 PVALEFA0A1B0GWK0 134 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 FAM86B1E9PN63 330 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 hCG_1984214I3L0E3 225 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 MEIS2O14770 477 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 NCK2O43639 380 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 FAM86B2P0C5J1 330 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 TNNT3P45378 269 aaPredicted RBP12.78□□□□□ -0.36
CDCA7-208ENST00000496441 KIF11P52732 1056 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 POLR2FP61218 127 aaKnown RBP12.78□□□□□ -0.36
CDCA7-208ENST00000496441 RASSF7Q02833 373 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms