RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	CCDC62	Q6P9F0	684 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	VSIG10L	Q86VR7	867 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	CUL5	Q93034	780 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	AP5M1	Q9H0R1	490 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	SPC25	Q9HBM1	224 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325		Q9Y3F1	56 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	FRMPD4	Q14CM0	1322 aa		18.22	■□□□□ 0.51
PRKCZ-222	ENST00000496325	TRIP12	Q14669	1992 aa	Predicted RBP	18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	SCN10A	Q9Y5Y9	1956 aa		18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PRPF3	O43395	683 aa	Known RBP	18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	TXN	P10599	105 aa	Known RBP	18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	NAPA	P54920	295 aa		18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	FSCN1	Q16658	493 aa	Known RBP	18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PFKFB3	Q16875	520 aa	Predicted RBP	18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	LY6K	Q17RY6	165 aa		18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	PCSK9	Q8NBP7	692 aa	Known RBP	18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	18.21	■□□□□ 0.51	3e-6	■■□□□ 11.7
PRKCZ-222	ENST00000496325	PBX4	Q9BYU1	374 aa		18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	TPCN1	Q9ULQ1	816 aa		18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	CHD9	Q3L8U1	2897 aa		18.21	■□□□□ 0.51
PRKCZ-222	ENST00000496325	MOXD2P	A6NHM9	499 aa		18.2	■□□□□ 0.5
PRKCZ-222	ENST00000496325	SCG2	P13521	617 aa		18.2	■□□□□ 0.5
PRKCZ-222	ENST00000496325	IFNAR1	P17181	557 aa		18.2	■□□□□ 0.5
PRKCZ-222	ENST00000496325	AK2	P54819	239 aa		18.2	■□□□□ 0.5
PRKCZ-222	ENST00000496325	MRPS9	P82933	396 aa	Known RBP	18.2	■□□□□ 0.5
PRKCZ-222	ENST00000496325	FAAP100	Q0VG06	881 aa		18.2	■□□□□ 0.5
PRKCZ-222	ENST00000496325	TTLL4	Q14679	1199 aa		18.2	■□□□□ 0.5
PRKCZ-222	ENST00000496325	C16orf59	Q7L2K0	433 aa		18.2	■□□□□ 0.5
PRKCZ-222	ENST00000496325	OR6J1	Q8NGC5	347 aa		18.2	■□□□□ 0.5
PRKCZ-222	ENST00000496325	GAS2L1	Q99501	681 aa	Predicted RBP	18.2	■□□□□ 0.5
PRKCZ-222	ENST00000496325	BARHL2	Q9NY43	387 aa		18.2	■□□□□ 0.5
PRKCZ-222	ENST00000496325	ADAMTS3	O15072	1205 aa		18.19	■□□□□ 0.5
PRKCZ-222	ENST00000496325	CCND2	P30279	289 aa		18.19	■□□□□ 0.5
PRKCZ-222	ENST00000496325	MRPS5	P82675	430 aa	Known RBP	18.19	■□□□□ 0.5
PRKCZ-222	ENST00000496325	CXCL17	Q6UXB2	119 aa		18.19	■□□□□ 0.5
PRKCZ-222	ENST00000496325	SLC26A6	Q9BXS9	759 aa		18.19	■□□□□ 0.5
PRKCZ-222	ENST00000496325	RIC8A	Q9NPQ8	531 aa		18.19	■□□□□ 0.5
PRKCZ-222	ENST00000496325	STARD7	Q9NQZ5	370 aa		18.19	■□□□□ 0.5
PRKCZ-222	ENST00000496325	TMEM39A	Q9NV64	488 aa		18.19	■□□□□ 0.5
PRKCZ-222	ENST00000496325	DDX41	Q9UJV9	622 aa	Known RBP	18.19	■□□□□ 0.5
PRKCZ-222	ENST00000496325	GTF3C3	Q9Y5Q9	886 aa		18.19	■□□□□ 0.5
PRKCZ-222	ENST00000496325	XIRP2	A4UGR9	3374 aa		18.19	■□□□□ 0.5
PRKCZ-222	ENST00000496325	SMCO2	A6NFE2	343 aa		18.18	■□□□□ 0.5
PRKCZ-222	ENST00000496325	NKRF	O15226	690 aa	Known RBP eCLIP	18.18	■□□□□ 0.5	2e-6	■■□□□ 13.4
PRKCZ-222	ENST00000496325	DTNB	O60941	627 aa		18.18	■□□□□ 0.5
PRKCZ-222	ENST00000496325	NEK4	P51957	841 aa		18.18	■□□□□ 0.5
PRKCZ-222	ENST00000496325	SCRN1	Q12765	414 aa		18.18	■□□□□ 0.5
PRKCZ-222	ENST00000496325	PPP1R18	Q6NYC8	613 aa		18.18	■□□□□ 0.5
PRKCZ-222	ENST00000496325	PGBD1	Q96JS3	809 aa		18.18	■□□□□ 0.5
PRKCZ-222	ENST00000496325	RNF26	Q9BY78	433 aa	Predicted RBP	18.18	■□□□□ 0.5
PRKCZ-222	ENST00000496325	RTEL1	Q9NZ71	1219 aa		18.18	■□□□□ 0.5
PRKCZ-222	ENST00000496325	PCDHA6	Q9UN73	950 aa		18.18	■□□□□ 0.5
PRKCZ-222	ENST00000496325	PCDHA8	Q9Y5H6	950 aa		18.18	■□□□□ 0.5
PRKCZ-222	ENST00000496325	KAT6A	Q92794	2004 aa		18.18	■□□□□ 0.5
PRKCZ-222	ENST00000496325	WDR81	Q562E7	1941 aa		18.17	■□□□□ 0.5
PRKCZ-222	ENST00000496325	hCG_1984214	I3L0E3	225 aa		18.17	■□□□□ 0.5
PRKCZ-222	ENST00000496325	LARGE1	O95461	756 aa		18.17	■□□□□ 0.5
PRKCZ-222	ENST00000496325	ADCY7	P51828	1080 aa		18.17	■□□□□ 0.5
PRKCZ-222	ENST00000496325	ARHGAP1	Q07960	439 aa		18.17	■□□□□ 0.5
PRKCZ-222	ENST00000496325	ZNF713	Q8N859	430 aa	Predicted RBP	18.17	■□□□□ 0.5
PRKCZ-222	ENST00000496325	VTI1A	Q96AJ9	217 aa		18.17	■□□□□ 0.5
PRKCZ-222	ENST00000496325	GLT1D1	Q96MS3	346 aa		18.17	■□□□□ 0.5
PRKCZ-222	ENST00000496325	KIF2C	Q99661	725 aa		18.17	■□□□□ 0.5
PRKCZ-222	ENST00000496325	TMEM260	Q9NX78	707 aa		18.17	■□□□□ 0.5
PRKCZ-222	ENST00000496325	MRVI1	Q9Y6F6	885 aa		18.17	■□□□□ 0.5
PRKCZ-222	ENST00000496325	CHD7	Q9P2D1	2997 aa		18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	SORBS3	O60504	671 aa		18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	PFKFB2	O60825	505 aa		18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	IGFBP4	P22692	258 aa		18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	AKAP17A	Q02040	695 aa	Known RBP	18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	SP2	Q02086	613 aa		18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	TFF2	Q03403	129 aa		18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	SSRP1	Q08945	709 aa	Known RBP	18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	SEMA3F	Q13275	785 aa		18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	TMEM240	Q5SV17	173 aa		18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	PCNX4	Q63HM2	1172 aa		18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	SLK	Q9H2G2	1235 aa	Predicted RBP	18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	BCAS3	Q9H6U6	928 aa		18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325	ELP1	O95163	1332 aa		18.16	■□□□□ 0.5
PRKCZ-222	ENST00000496325		A6NJR5	290 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	SPDYE3	A6NKU9	549 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	CPLX1	O14810	134 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	ZEB2	O60315	1214 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	GH1	P01241	217 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	MYL3	P08590	195 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	ACR	P10323	421 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	CLK2	P49760	499 aa	Known RBP	18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	CDK7	P50613	346 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	PSMC6	P62333	389 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	ANKRD1	Q15327	319 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	ME3	Q16798	604 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	RASIP1	Q5U651	963 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	AFG1L	Q8WV93	481 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	INPP4A	Q96PE3	977 aa	Predicted RBP	18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	C22orf23	Q9BZE7	217 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	GRIN2D	O15399	1336 aa		18.15	■□□□□ 0.5
PRKCZ-222	ENST00000496325	TIMP1	P01033	207 aa		18.14	■□□□□ 0.49
PRKCZ-222	ENST00000496325	BMP1	P13497	986 aa		18.14	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CPT1A	P50416	773 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms