RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	ADAM17	P78536	824 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	EMC4	Q5J8M3	183 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	MCTP2	Q6DN12	878 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	PPIL6	Q8IXY8	311 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	MBD6	Q96DN6	1003 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	CAPN10	Q9HC96	672 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	INVS	Q9Y283	1065 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	MYRF	Q9Y2G1	1151 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	PCDHA2	Q9Y5H9	948 aa		4.18	□□□□□ -1.74
RAD50-208	ENST00000496204	B4GALT3	O60512	393 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	DDAH1	O94760	285 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	GJB6	O95452	261 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	SSB	P05455	408 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	LSAMP	Q13449	338 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	ZNF827	Q17R98	1081 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	SLC10A6	Q3KNW5	377 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	TEPP	Q6URK8	271 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	ZC3H18	Q86VM9	953 aa	Known RBP	4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	C1QTNF3	Q9BXJ4	246 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	ZNF408	Q9H9D4	720 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	SMPD4	Q9NXE4	827 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	DTL	Q9NZJ0	730 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204	LRP2BP	Q9P2M1	347 aa		4.17	□□□□□ -1.74
RAD50-208	ENST00000496204		A0A1W2PQU0	124 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	C9orf118	A6NHY6	69 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	MYO1B	O43795	1136 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	MSC	O60682	206 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	TNFRSF1A	P19438	455 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	ERCC5	P28715	1186 aa	Predicted RBP	4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	MLLT6	P55198	1093 aa	Predicted RBP	4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	PPP2R2A	P63151	447 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	NKX3-2	P78367	333 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	KIAA2012	Q0VF49	1180 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	FXN	Q16595	210 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	STEAP3	Q658P3	488 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	PROSER1	Q86XN7	944 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	MCF2L2	Q86YR7	1114 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	LGI4	Q8N135	537 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	CELF2-AS1	Q8N7Q2	184 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	TOE1	Q96GM8	510 aa	Known RBP	4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	BORCS6	Q96GS4	357 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	YTHDC1	Q96MU7	727 aa	Known RBP	4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	SAMD11	Q96NU1	681 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	GPR20	Q99678	358 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	TINF2	Q9BSI4	451 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	NGRN	Q9NPE2	291 aa	Known RBP	4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	CLDND1	Q9NY35	253 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	HSPBP1	Q9NZL4	362 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	PCDHB4	Q9Y5E5	795 aa		4.16	□□□□□ -1.74
RAD50-208	ENST00000496204	C1QTNF3-AMACR	E9PGA6	284 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	DLX3	O60479	287 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	COL6A1	P12109	1028 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	IL13	P35225	146 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	KCNJ6	P48051	423 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	MAP4K2	Q12851	820 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	EEPD1	Q7L9B9	569 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	LIMS2	Q7Z4I7	341 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	VPS37D	Q86XT2	251 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	TTC9B	Q8N6N2	239 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	ZSWIM3	Q96MP5	696 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	C8orf49	Q96NF6	230 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	EPN3	Q9H201	632 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	TMPRSS5	Q9H3S3	457 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	PODXL2	Q9NZ53	605 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	PPP4R1L	Q9P1A2	415 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	RBPJL	Q9UBG7	517 aa		4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	COA3	Q9Y2R0	106 aa	Predicted RBP	4.15	□□□□□ -1.75
RAD50-208	ENST00000496204	MATN3	O15232	486 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	DGKI	O75912	1065 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	ZNF20	P17024	532 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	CHRNA2	Q15822	529 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	CPZ	Q66K79	652 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	PKN3	Q6P5Z2	889 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	CLEC4D	Q8WXI8	215 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	LCOR	Q96JN0	433 aa	Predicted RBP	4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	IER2	Q9BTL4	223 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	JAM3	Q9BX67	310 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	SMOC1	Q9H4F8	434 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	EPB41L1	Q9H4G0	881 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	GPR27	Q9NS67	375 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	MYOT	Q9UBF9	498 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	ASH2L	Q9UBL3	628 aa		4.14	□□□□□ -1.75
RAD50-208	ENST00000496204	KLF4	O43474	513 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	TCF3	P15923	654 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	CDSN	Q15517	529 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	NTRK3	Q16288	839 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	PRAMEF18	Q5VWM3	479 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	BORA	Q6PGQ7	559 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	FAM124A	Q86V42	546 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	PHOSPHO1	Q8TCT1	267 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	LOXL4	Q96JB6	756 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	CHAMP1	Q96JM3	812 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	YIPF4	Q9BSR8	244 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms