RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 BRI3BPQ8WY22 251 aa5.4□□□□□ -1.54
VPS52-222ENST00000495981 KLHL6Q8WZ60 621 aa5.4□□□□□ -1.54
VPS52-222ENST00000495981 FAM89AQ96GI7 184 aa5.4□□□□□ -1.54
VPS52-222ENST00000495981 LPIN3Q9BQK8 851 aa5.4□□□□□ -1.54
VPS52-222ENST00000495981 EMILIN2Q9BXX0 1053 aa5.4□□□□□ -1.54
VPS52-222ENST00000495981 IGFLR1Q9H665 355 aa5.4□□□□□ -1.54
VPS52-222ENST00000495981 ATP13A2Q9NQ11 1180 aa5.4□□□□□ -1.54
VPS52-222ENST00000495981 MBIPQ9NS73 344 aa5.4□□□□□ -1.54
VPS52-222ENST00000495981 TRMT112Q9UI30 125 aaKnown RBP5.4□□□□□ -1.54
VPS52-222ENST00000495981 SLC6A14Q9UN76 642 aa5.4□□□□□ -1.54
VPS52-222ENST00000495981 FAN1Q9Y2M0 1017 aa5.4□□□□□ -1.54
VPS52-222ENST00000495981 PCDHAC2Q9Y5I4 1007 aa5.4□□□□□ -1.54
VPS52-222ENST00000495981 IRS2Q9Y4H2 1338 aa5.4□□□□□ -1.55
VPS52-222ENST00000495981 MED23Q9ULK4 1368 aa5.4□□□□□ -1.55
VPS52-222ENST00000495981 XIRP2A4UGR9 3374 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 A0A087X0B3 334 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 WNT10BO00744 389 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 SIN3BO75182 1162 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 SASH1O94885 1247 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 GJB1P08034 283 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 GSTP1P09211 210 aaKnown RBP5.39□□□□□ -1.55
VPS52-222ENST00000495981 CPB1P15086 417 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 PTPRAP18433 802 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 ITGA6P23229 1130 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 AIMP1Q12904 312 aaKnown RBP5.39□□□□□ -1.55
VPS52-222ENST00000495981 TRIM28Q13263 835 aaKnown RBP5.39□□□□□ -1.55
VPS52-222ENST00000495981 RALBP1Q15311 655 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 SLC10A6Q3KNW5 377 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 TM4SF20Q53R12 229 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 ZNF787Q6DD87 383 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 OVOS1Q6IE37 1185 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 UNC5AQ6ZN44 842 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 FAM35AQ86V20 835 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 SYNPOQ8N3V7 929 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 PRPF38AQ8NAV1 312 aaKnown RBP5.39□□□□□ -1.55
VPS52-222ENST00000495981 ZSCAN1Q8NBB4 408 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 TBC1D16Q8TBP0 767 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 GPBAR1Q8TDU6 330 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 U2AF1L4Q8WU68 220 aaKnown RBP5.39□□□□□ -1.55
VPS52-222ENST00000495981 TNFRSF25Q93038 417 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 CDX2Q99626 313 aaPredicted RBP5.39□□□□□ -1.55
VPS52-222ENST00000495981 HTATIP2Q9BUP3 242 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 UBE2OQ9C0C9 1292 aaKnown RBP5.39□□□□□ -1.55
VPS52-222ENST00000495981 LACRTQ9GZZ8 138 aa5.39□□□□□ -1.55
VPS52-222ENST00000495981 SMG9Q9H0W8 520 aaKnown RBP5.39□□□□□ -1.55
VPS52-222ENST00000495981 G3BP2Q9UN86 482 aaKnown RBP5.39□□□□□ -1.55
VPS52-222ENST00000495981 NSFL1CQ9UNZ2 370 aaKnown RBP5.39□□□□□ -1.55
VPS52-222ENST00000495981 CACNA1FO60840 1977 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 SLC22A31A6NKX4 558 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 IRS4O14654 1257 aaPredicted RBP5.38□□□□□ -1.55
VPS52-222ENST00000495981 TM4SF5O14894 197 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 UFL1O94874 794 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 CTSBP07858 339 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 INHBEP58166 350 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 TBC1D8BQ0IIM8 1120 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 IKBKEQ14164 716 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 CBX2Q14781 532 aaPredicted RBP5.38□□□□□ -1.55
VPS52-222ENST00000495981 PCSK7Q16549 785 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 TMEM67Q5HYA8 995 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 WIPI1Q5MNZ9 446 aaPredicted RBP5.38□□□□□ -1.55
VPS52-222ENST00000495981 FOXB2Q5VYV0 432 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 DUSP27Q5VZP5 1158 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 ARMC9Q7Z3E5 817 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 TDHQ8IZJ6 230 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 ZBTB38Q8NAP3 1195 aaPredicted RBP5.38□□□□□ -1.55
VPS52-222ENST00000495981 ZSWIM2Q8NEG5 633 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 MAFAQ8NHW3 353 aaPredicted RBP5.38□□□□□ -1.55
VPS52-222ENST00000495981 RUNDC1Q96C34 613 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 ATG4CQ96DT6 458 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 PLPPR2Q96GM1 343 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 GMCL1Q96IK5 515 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 TRIM47Q96LD4 638 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 SLC9A7Q96T83 725 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 SPATA9Q9BWV2 254 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 RNF208Q9H0X6 261 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 PNNQ9H307 717 aaKnown RBP5.38□□□□□ -1.55
VPS52-222ENST00000495981 GMPR2Q9P2T1 348 aaKnown RBP5.38□□□□□ -1.55
VPS52-222ENST00000495981 DBF4Q9UBU7 674 aaPredicted RBP5.38□□□□□ -1.55
VPS52-222ENST00000495981 REV1Q9UBZ9 1251 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 PCDHB10Q9UN67 800 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 PLAAQ9Y263 795 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 ZSWIM8A7E2V4 1837 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 SYNGAP1Q96PV0 1343 aa5.38□□□□□ -1.55
VPS52-222ENST00000495981 TNFRSF10CO14798 259 aa5.37□□□□□ -1.55
VPS52-222ENST00000495981 SUSD5O60279 629 aa5.37□□□□□ -1.55
VPS52-222ENST00000495981 ZNF862O60290 1169 aa5.37□□□□□ -1.55
VPS52-222ENST00000495981 USP2O75604 605 aaPredicted RBP5.37□□□□□ -1.55
VPS52-222ENST00000495981 S100BP04271 92 aaPredicted RBP5.37□□□□□ -1.55
VPS52-222ENST00000495981 PCCAP05165 728 aaPredicted RBP5.37□□□□□ -1.55
VPS52-222ENST00000495981 ZBTB48P10074 688 aaPredicted RBP5.37□□□□□ -1.55
VPS52-222ENST00000495981 NME1P15531 152 aaKnown RBP5.37□□□□□ -1.55
VPS52-222ENST00000495981 KLRK1P26718 216 aa5.37□□□□□ -1.55
VPS52-222ENST00000495981 CTSWP56202 376 aa5.37□□□□□ -1.55
VPS52-222ENST00000495981 PCBP4P57723 403 aaKnown RBP5.37□□□□□ -1.55
VPS52-222ENST00000495981 LACTBP83111 547 aaPredicted RBP5.37□□□□□ -1.55
VPS52-222ENST00000495981 AP3B2Q13367 1082 aa5.37□□□□□ -1.55
VPS52-222ENST00000495981 LRRFIP1Q32MZ4 808 aaKnown RBP5.37□□□□□ -1.55
VPS52-222ENST00000495981 FAM109BQ6ICB4 259 aaPredicted RBP5.37□□□□□ -1.55
VPS52-222ENST00000495981 VHLLQ6RSH7 139 aa5.37□□□□□ -1.55
VPS52-222ENST00000495981 CERS3Q8IU89 383 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms