RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 PCNX4Q63HM2 1172 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 CCDC174Q6PII3 467 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 FOXR2Q6PJQ5 311 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 SRCAPQ6ZRS2 3230 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 OTOP1Q7RTM1 612 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 PDILTQ8N807 584 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 MB21D1Q8N884 522 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 SMARCE1Q969G3 411 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 DHX58Q96C10 678 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 ATG4CQ96DT6 458 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 WNK4Q96J92 1243 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 HSD17B14Q9BPX1 270 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 NUDT12Q9BQG2 462 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 POLR3CQ9BUI4 534 aaPredicted RBP7.65□□□□□ -1.18
MSH5-217ENST00000494458 GTPBP4Q9BZE4 634 aaKnown RBP7.65□□□□□ -1.18
MSH5-217ENST00000494458 CCPG1Q9ULG6 757 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 RIPK3Q9Y572 518 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 UBIAD1Q9Y5Z9 338 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 LOC285556D6RIA3 1793 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 A0A087WWV3 80 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 PVALEFA0A1B0GWK0 134 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 LRRC10BA6NIK2 292 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 SMTNL1A8MU46 457 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 MAFGO15525 162 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 DHX15O43143 795 aaKnown RBP7.64□□□□□ -1.19
MSH5-217ENST00000494458 CFBP00751 764 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 PLCG1P19174 1290 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 RPA1P27694 616 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 CDC25BP30305 580 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 MRPS9P82933 396 aaKnown RBP7.64□□□□□ -1.19
MSH5-217ENST00000494458 TMEM266Q2M3C6 531 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 GPAT2Q6NUI2 795 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.64□□□□□ -1.19
MSH5-217ENST00000494458 GRAMD1CQ8IYS0 662 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 GIMAP8Q8ND71 665 aaPredicted RBP7.64□□□□□ -1.19
MSH5-217ENST00000494458 CHST13Q8NET6 341 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 CYP2W1Q8TAV3 490 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 MRFAP1L1Q96HT8 127 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 TRERF1Q96PN7 1200 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 RIT2Q99578 217 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 MXRA8Q9BRK3 442 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 TRIM9Q9C026 710 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 TANGO6Q9C0B7 1094 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 NT5C3AQ9H0P0 336 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 EHMT1Q9H9B1 1298 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 RAVER2Q9HCJ3 691 aaKnown RBP7.64□□□□□ -1.19
MSH5-217ENST00000494458 TMOD4Q9NZQ9 345 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 SLC45A1Q9Y2W3 748 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 CSADQ9Y600 493 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 PTPRFP10586 1907 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 A0A0G2JMZ2 1700 aa7.64□□□□□ -1.19
MSH5-217ENST00000494458 OTOFQ9HC10 1997 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 FRMD3A2A2Y4 597 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 CNMDO75829 334 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 ADCY5O95622 1261 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 RPN1P04843 607 aaKnown RBP7.63□□□□□ -1.19
MSH5-217ENST00000494458 ITGB5P18084 799 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 NF2P35240 595 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 GJA5P36382 358 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 STAT6P42226 847 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 AFMP43652 599 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 ZNF75DP51815 510 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 RPS6P62753 249 aaKnown RBP7.63□□□□□ -1.19
MSH5-217ENST00000494458 SETQ01105 290 aaPredicted RBP7.63□□□□□ -1.19
MSH5-217ENST00000494458 AMPD3Q01432 767 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 PRR16Q569H4 304 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 TREML2Q5T2D2 321 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 ZNF658Q5TYW1 1059 aaPredicted RBP7.63□□□□□ -1.19
MSH5-217ENST00000494458 KRT79Q5XKE5 535 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 ARMC9Q7Z3E5 817 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 KCNK18Q7Z418 384 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 VSIG10LQ86VR7 867 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 CATSPER3Q86XQ3 398 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 RIOX2Q8IUF8 465 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 ANP32BQ92688 251 aaKnown RBP7.63□□□□□ -1.19
MSH5-217ENST00000494458 RAD54LQ92698 747 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 DNAJC19Q96DA6 116 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 CALML4Q96GE6 196 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 CLMNQ96JQ2 1002 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 MS4A4AQ96JQ5 239 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 PDCD2LQ9BRP1 358 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 TEX13BQ9BXU2 312 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 JADE2Q9NQC1 790 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 RMND1Q9NWS8 449 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 DACH1Q9UI36 760 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 AGTPBP1Q9UPW5 1226 aa7.63□□□□□ -1.19
MSH5-217ENST00000494458 KDM3AQ9Y4C1 1321 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 MYMKA6NI61 221 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 BIN1O00499 593 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 STAM2O75886 525 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 SLITRK3O94933 977 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 LYPLA2O95372 231 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 ARP10275 920 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 ALAS1P13196 640 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 CASP1P29466 404 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 STAT3P40763 770 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 SLC12A3P55017 1021 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 MYL5Q02045 173 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 FMR1Q06787 632 aaKnown RBP eCLIP7.62□□□□□ -1.19
MSH5-217ENST00000494458 PSMD2Q13200 908 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms